RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
ITGB4-202ENST00000449880 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
ITGB4-202ENST00000449880 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
ITGB4-202ENST00000449880 YPEL3P61236 119 aaPredicted RBP11.53□□□□□ -0.56
ITGB4-202ENST00000449880 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.56
ITGB4-202ENST00000449880 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.56
ITGB4-202ENST00000449880 MGST2Q99735 147 aa11.52□□□□□ -0.56
ITGB4-202ENST00000449880 ZNF319Q9P2F9 582 aa11.52□□□□□ -0.56
ITGB4-202ENST00000449880 ERG28Q9UKR5 140 aa11.52□□□□□ -0.56
ITGB4-202ENST00000449880 SCN8AQ9UQD0 1980 aa11.52□□□□□ -0.56
ITGB4-202ENST00000449880 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 IGLC2P0DOY2 106 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 IGLC3P0DOY3 106 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 SUMO2P61956 95 aaKnown RBP11.52□□□□□ -0.57
ITGB4-202ENST00000449880 LAGE3Q14657 143 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 NUP35Q8NFH5 326 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 JMJD8Q96S16 334 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 A0A087X0K7 114 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
ITGB4-202ENST00000449880 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
ITGB4-202ENST00000449880 TMEM238C9JI98 176 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 NPSP0C0P6 89 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 NTN3O00634 580 aaPredicted RBP11.51□□□□□ -0.57
ITGB4-202ENST00000449880 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
ITGB4-202ENST00000449880 GATA2P23769 480 aaPredicted RBP11.51□□□□□ -0.57
ITGB4-202ENST00000449880 TNFRSF18Q9Y5U5 241 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1-5P01602 117 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 LHX2P50458 406 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 VKORC1Q9BQB6 163 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 C9orf118A6NHY6 69 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 TGFAP01135 160 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 RNF182Q8N6D2 247 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 FBXL15Q9H469 300 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 SPTBP11277 2137 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 ANAPC1Q9H1A4 1944 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1-12A0A0C4DH73 117 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 M0R381 172 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1D-12P01611 117 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
ITGB4-202ENST00000449880 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV2OR16-5A0A0B4J2B6 119 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 PYYP10082 97 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 CDKN1BP46527 198 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 TMEM95Q3KNT9 176 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1D-33P01593 117 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 IGKV1-33P01594 117 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
ITGB4-202ENST00000449880 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 HGFACQ04756 655 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 TMEM42Q69YG0 159 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 ABCA7Q8IZY2 2146 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 IFI27P40305 119 aaPredicted RBP11.5□□□□□ -0.57
ITGB4-202ENST00000449880 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 C11orf68Q9H3H3 251 aaKnown RBP11.5□□□□□ -0.57
ITGB4-202ENST00000449880 PEMTQ9UBM1 199 aa11.5□□□□□ -0.57
ITGB4-202ENST00000449880 CT83Q5H943 113 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 LCN12Q6JVE5 192 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV3-48P01763 117 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 LYPD6BQ8NI32 183 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
ITGB4-202ENST00000449880 NPFFR1Q9GZQ6 430 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 IGHV2-26A0A0B4J1V2 119 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 C17orf100A8MU93 164 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 K7EP34 96 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 SPANXCQ9NY87 97 aa11.49□□□□□ -0.57
ITGB4-202ENST00000449880 PSG7Q13046 419 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 ZNF837Q96EG3 531 aaPredicted RBP11.48□□□□□ -0.57
ITGB4-202ENST00000449880 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 F8W1H4 67 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 FAM216BQ8N7L0 139 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 TRGV9Q99603 122 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 LILRA1O75019 489 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 CHAC1Q9BUX1 264 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 PNRC2Q9NPJ4 139 aaKnown RBP11.48□□□□□ -0.57
ITGB4-202ENST00000449880 CDKN1AP38936 164 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 PLXNA2O75051 1894 aa11.48□□□□□ -0.57
ITGB4-202ENST00000449880 TCRAP04437 139 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 MYOD1P15172 320 aa11.47□□□□□ -0.57
ITGB4-202ENST00000449880 CNTFRP26992 372 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms