RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ESDP10768 282 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 CST9LP1Q5W188 147 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 Q6ZS46 218 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 IL22RA2Q969J5 263 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 A6NDX4 124 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 TNFSF12O43508 249 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 PPBPP02775 128 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 VDAC1P21796 283 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 IL3RAP26951 378 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 CNTFRP26992 372 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 RPL15P61313 204 aaKnown RBP7.84□□□□□ -1.15
CCDC171-203ENST00000449575 RPL30P62888 115 aaKnown RBP7.84□□□□□ -1.15
CCDC171-203ENST00000449575 ETFRF1Q6IPR1 90 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-203ENST00000449575 RAB40CQ96S21 281 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 MANBALQ9NQG1 85 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 UQCR10Q9UDW1 63 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 SLC45A2Q9UMX9 530 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 PAM16Q9Y3D7 125 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 OOSP1A8MZH6 123 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 TOMM40O96008 361 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 HES1Q14469 280 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 CXorf66Q5JRM2 361 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 OR8G2PQ6IF36 304 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 CCDC144NLQ6NUI1 221 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 ZNF818PQ6ZRF7 136 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 SELENOHQ8IZQ5 122 aaKnown RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 ZNF738Q8NE65 137 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 S1PR3Q99500 378 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 SLC39A9Q9NUM3 307 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 CCL25O15444 150 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 IGKV1-16P04430 117 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 OR5G3P0C626 314 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 GNRHRP30968 328 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 TFPI2P48307 235 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 EIF4EBP1Q13541 118 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 TMEM256Q8N2U0 113 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 OR5AU1Q8NGC0 362 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 RPUSD4Q96CM3 377 aaKnown RBP7.83□□□□□ -1.16
CCDC171-203ENST00000449575 SPXQ9BT56 116 aa7.83□□□□□ -1.16
CCDC171-203ENST00000449575 H0YJW9 148 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 AMY1AP04745 511 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 DUTP33316 252 aaKnown RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 BRWD1-AS2P59051 145 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 UBE2G2P60604 165 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 BLCAPP62952 87 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 FOXL1Q12952 345 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 ZNF726P1Q15940 193 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 PARLQ9H300 379 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 HBG1P69891 147 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 HBG2P69892 147 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 TMEM86BQ8N661 226 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 Q8N6K4 173 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 OR5AN1Q8NGI8 311 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 JMJD8Q96S16 334 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 RNF2Q99496 336 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 MDFIQ99750 246 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 HSPB7Q9UBY9 170 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 TET2Q6N021 2002 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 F6UZH7 168 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 SLC25A6P12236 298 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 CD1BP29016 333 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 YPEL3P61236 119 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 SUMO1P63165 101 aaKnown RBP7.82□□□□□ -1.16
CCDC171-203ENST00000449575 EBI3Q14213 229 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 MSMO1Q15800 293 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 Q6ZWC4 215 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 TBC1D26Q86UD7 250 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 KLHDC1Q8N7A1 406 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 VN1R17PQ8TDU5 208 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 DDB2Q92466 427 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 SLC25A33Q9BSK2 321 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 C1RLQ9NZP8 487 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
CCDC171-203ENST00000449575 TMEM50AO95807 157 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
CCDC171-203ENST00000449575 FAM78BQ5VT40 261 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 FAM71F2Q6NXP2 309 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 TMEM144Q7Z5S9 345 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-203ENST00000449575 HSPB9Q9BQS6 159 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 LAMTOR2Q9Y2Q5 125 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 TIMM9Q9Y5J7 89 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 NDUFB8O95169 186 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 KRASP01116 189 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 FAM106CPP0CH98 169 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 PAX9P55771 341 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 RIPPLY3P57055 190 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 MMDQ15546 238 aa7.81□□□□□ -1.16
CCDC171-203ENST00000449575 Q6ZSV7 163 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms