RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 MFAP2P55001 183 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 PAX2Q02962 417 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 PATE2Q6UY27 113 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 SGMS2Q8NHU3 365 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 RPEQ96AT9 228 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 RNF5Q99942 180 aa13.04□□□□□ -0.32
OTUB1-204ENST00000447683 LOC105371242A0A075B767 164 aa13.03□□□□□ -0.32
OTUB1-204ENST00000447683 TRAV30A0A087WSZ9 112 aa13.03□□□□□ -0.32
OTUB1-204ENST00000447683 OR10J4P0C629 311 aa13.03□□□□□ -0.32
OTUB1-204ENST00000447683 CRYBB3P26998 211 aa13.03□□□□□ -0.32
OTUB1-204ENST00000447683 ZNF90Q03938 601 aa13.03□□□□□ -0.32
OTUB1-204ENST00000447683 TRAV5A0A0B4J249 113 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 HELTA6NFD8 242 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 COX7A2P2O60397 106 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 LY6HO94772 140 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 IGHV3-48P01763 117 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.32
OTUB1-204ENST00000447683 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 PPP1R27Q86WC6 154 aa13.02□□□□□ -0.32
OTUB1-204ENST00000447683 K7ERU9 68 aa13.02□□□□□ -0.33
OTUB1-204ENST00000447683 HCP5Q6MZN7 132 aa13.02□□□□□ -0.33
OTUB1-204ENST00000447683 OR1L6Q8NGR2 347 aa13.02□□□□□ -0.33
OTUB1-204ENST00000447683 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
OTUB1-204ENST00000447683 TIMD4Q96H15 378 aa13.02□□□□□ -0.33
OTUB1-204ENST00000447683 NBASA2RRP1 2371 aa13.02□□□□□ -0.33
OTUB1-204ENST00000447683 ARHGAP32A7KAX9 2087 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 A0A0U1RQK1 487 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 ZNF320A2RRD8 509 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
OTUB1-204ENST00000447683 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 TRAV9-1A0A075B6T8 112 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 TEX22C9J3V5 150 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 CENPWQ5EE01 88 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 RUSC1-AS1Q66K80 236 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 TMEM116Q8NCL8 245 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 TRGV9Q99603 122 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
OTUB1-204ENST00000447683 ATRXP46100 2492 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 CORTO00230 105 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
OTUB1-204ENST00000447683 OR11H6Q8NGC7 330 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 TBX15Q96SF7 602 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 TNFRSF19Q9NS68 423 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 COX11Q9Y6N1 276 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 GNG4P50150 75 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 OCIAD2Q56VL3 154 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 TPTE2P1Q5T6R2 138 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 PRSS57Q6UWY2 283 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 FBXL15Q9H469 300 aa13□□□□□ -0.33
OTUB1-204ENST00000447683 F11RQ9Y624 299 aaKnown RBP13□□□□□ -0.33
OTUB1-204ENST00000447683 NDUFB8O95169 186 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 DTX2Q86UW9 622 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 PAXXQ9BUH6 204 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 ZNF705FA8MVS1 300 aaPredicted RBP12.99□□□□□ -0.33
OTUB1-204ENST00000447683 M0R1W7 72 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 ZNF705DP0CH99 300 aaPredicted RBP12.99□□□□□ -0.33
OTUB1-204ENST00000447683 ZNF705BP0CI00 300 aaPredicted RBP12.99□□□□□ -0.33
OTUB1-204ENST00000447683 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 V9GYV3 84 aa12.99□□□□□ -0.33
OTUB1-204ENST00000447683 PYYP10082 97 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 HTR1DP28221 377 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 SRSF12Q8WXF0 261 aaKnown RBP12.98□□□□□ -0.33
OTUB1-204ENST00000447683 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
OTUB1-204ENST00000447683 DPM3Q9P2X0 92 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 TRAPPC1Q9Y5R8 145 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 COL6A6A6NMZ7 2263 aa12.98□□□□□ -0.33
OTUB1-204ENST00000447683 SLC17A3O00476 420 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 TIMM23O14925 209 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 MOSP00540 346 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
OTUB1-204ENST00000447683 PAFAH1B2P68402 229 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 FXYD5Q96DB9 178 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 MS4A10Q96PG2 267 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
OTUB1-204ENST00000447683 FCN1O00602 326 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 APELAP0DMC3 54 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 BATFQ16520 125 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 TIGITQ495A1 244 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 LINC00305Q7Z4B0 112 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 OSTCQ9NRP0 149 aa12.97□□□□□ -0.33
OTUB1-204ENST00000447683 PLP1P60201 277 aa12.96□□□□□ -0.33
OTUB1-204ENST00000447683 RHOGP84095 191 aa12.96□□□□□ -0.33
OTUB1-204ENST00000447683 CFHR4Q92496 578 aa12.96□□□□□ -0.33
OTUB1-204ENST00000447683 PERPQ96FX8 193 aa12.96□□□□□ -0.33
OTUB1-204ENST00000447683 CST9LQ9H4G1 147 aa12.96□□□□□ -0.33
OTUB1-204ENST00000447683 ODF3BA8MYP8 253 aa12.96□□□□□ -0.34
OTUB1-204ENST00000447683 SCGB1A1P11684 91 aa12.96□□□□□ -0.34
OTUB1-204ENST00000447683 PRTN3P24158 256 aa12.96□□□□□ -0.34
OTUB1-204ENST00000447683 TFPI2P48307 235 aa12.96□□□□□ -0.34
OTUB1-204ENST00000447683 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms