RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 H0YIZ8 118 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 CHEK1O14757 476 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 CST7O76096 145 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 HBG1P69891 147 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 HBG2P69892 147 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 ZNF90Q03938 601 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 SLC38A11Q08AI6 406 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 TMEM61Q8N0U2 210 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 ASB13Q8WXK3 278 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 NARS2Q96I59 477 aaKnown RBP13.75□□□□□ -0.21
PHTF1-207ENST00000446739 RHPN1-AS1Q9BWJ2 59 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 SLC25A31Q9H0C2 315 aa13.75□□□□□ -0.21
PHTF1-207ENST00000446739 A0A1W2PS18 150 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 IGSF23A1L1A6 192 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 K7EIL1 84 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
PHTF1-207ENST00000446739 CRYBB3P26998 211 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 S100A11P31949 105 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 LAMTOR1Q6IAA8 161 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 RBPMS2Q6ZRY4 209 aaKnown RBP13.74□□□□□ -0.21
PHTF1-207ENST00000446739 MRAPQ8TCY5 172 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 TMEM231Q9H6L2 316 aa13.74□□□□□ -0.21
PHTF1-207ENST00000446739 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHTF1-207ENST00000446739 USF2Q15853 346 aaPredicted RBP13.73□□□□□ -0.21
PHTF1-207ENST00000446739 LILRB2Q8N423 598 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 TMEM217Q8N7C4 229 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 RNF125Q96EQ8 232 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 RNF126Q9BV68 326 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 VSIRQ9H7M9 311 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 SELENOKQ9Y6D0 94 aa13.73□□□□□ -0.21
PHTF1-207ENST00000446739 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
PHTF1-207ENST00000446739 ZNF785A8K8V0 405 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 CD5P06127 495 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 GIPP09681 153 aaPredicted RBP13.72□□□□□ -0.21
PHTF1-207ENST00000446739 BAXQ07812 192 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 OR2F1Q13607 317 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 TEPPQ6URK8 271 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 BPIFCQ8NFQ6 507 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 ST8SIA2Q92186 375 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 RNF2Q99496 336 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 RABAC1Q9UI14 185 aa13.72□□□□□ -0.21
PHTF1-207ENST00000446739 IGHV3OR16-13A0A075B7E8 117 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 IGHV3-74A0A0B4J1X5 117 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 TSPAN4O14817 238 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 APOHP02749 345 aaPredicted RBP13.71□□□□□ -0.21
PHTF1-207ENST00000446739 SELENOTP62341 195 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 EWSR1Q01844 656 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHTF1-207ENST00000446739 VWC2Q2TAL6 325 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 CYP2G1PQ6ZSU1 146 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 GTSCR1Q86UQ5 136 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 MBD2Q9UBB5 411 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 PFDN2Q9UHV9 154 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 U3KQE9 123 aa13.71□□□□□ -0.21
PHTF1-207ENST00000446739 LYL1P12980 280 aa13.7□□□□□ -0.22
PHTF1-207ENST00000446739 NUP62P37198 522 aaPredicted RBP13.7□□□□□ -0.22
PHTF1-207ENST00000446739 EIF2B2P49770 351 aaKnown RBP13.7□□□□□ -0.22
PHTF1-207ENST00000446739 LYZP61626 148 aa13.7□□□□□ -0.22
PHTF1-207ENST00000446739 FGL1Q08830 312 aa13.7□□□□□ -0.22
PHTF1-207ENST00000446739 THAP6Q8TBB0 222 aa13.7□□□□□ -0.22
PHTF1-207ENST00000446739 SPAG8Q99932 426 aaPredicted RBP13.7□□□□□ -0.22
PHTF1-207ENST00000446739 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
PHTF1-207ENST00000446739 IGHV3-66A0A0C4DH42 116 aa13.69□□□□□ -0.22
PHTF1-207ENST00000446739 RAP2BP61225 183 aa13.69□□□□□ -0.22
PHTF1-207ENST00000446739 NHLH2Q02577 135 aa13.69□□□□□ -0.22
PHTF1-207ENST00000446739 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
PHTF1-207ENST00000446739 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
PHTF1-207ENST00000446739 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
PHTF1-207ENST00000446739 RAB31Q13636 194 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 DEFB121Q5J5C9 76 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 TMEM182Q6ZP80 229 aaPredicted RBP13.68□□□□□ -0.22
PHTF1-207ENST00000446739 ZNF546Q86UE3 836 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 SLC45A2Q9UMX9 530 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 SMAD5-AS1Q9Y6J3 95 aa13.68□□□□□ -0.22
PHTF1-207ENST00000446739 UBE2L5PA0A1B0GUS4 154 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 AGPAT2O15120 278 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 BUB3O43684 328 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 DFFBO76075 338 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 RPL12P30050 165 aaKnown RBP13.67□□□□□ -0.22
PHTF1-207ENST00000446739 S100A7P31151 101 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 CD81P60033 236 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 Q8N1Y9 231 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 NEURL2Q9BR09 285 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PHTF1-207ENST00000446739 OR4C46A6NHA9 309 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 LINC00869P0C866 280 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 ORM2P19652 201 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 PLP1P60201 277 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 GLMPQ8WWB7 406 aa13.66□□□□□ -0.22
PHTF1-207ENST00000446739 MGST2Q99735 147 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms