RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
VPS52-212ENST00000445902 J3QW42 95 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 NTN3O00634 580 aaPredicted RBP11.26□□□□□ -0.61
VPS52-212ENST00000445902 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 C6orf15Q6UXA7 325 aaPredicted RBP11.26□□□□□ -0.61
VPS52-212ENST00000445902 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 RBMXL3Q8N7X1 1067 aaKnown RBP11.26□□□□□ -0.61
VPS52-212ENST00000445902 TMEM105Q8N8V8 129 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
VPS52-212ENST00000445902 GPR82Q96P67 336 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 ITLN1Q8WWA0 313 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 SPRR3Q9UBC9 169 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
VPS52-212ENST00000445902 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 CIDEAO60543 219 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 RBPMS2Q6ZRY4 209 aaKnown RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 A0A0G2JLM5 398 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 SEC11AP67812 179 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 GCSAMQ8N6F7 178 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 RAI1Q7Z5J4 1906 aaPredicted RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 MOGAT3Q86VF5 341 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 THYN1Q9P016 225 aa11.25□□□□□ -0.61
VPS52-212ENST00000445902 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
VPS52-212ENST00000445902 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 K7EP34 96 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 CECR9P0C854 216 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 ROS1P08922 2347 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 DLL1O00548 723 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 COL8A1P27658 744 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 NHLH1Q02575 133 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 PPP1R35Q8TAP8 253 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
VPS52-212ENST00000445902 SRRM5B3KS81 715 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 APELAP0DMC3 54 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 HOXC12P31275 282 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 RPL24P83731 157 aaKnown RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 LOXL1Q08397 574 aaPredicted RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 OR1L8Q8NGR8 309 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 NDFIP1Q9BT67 221 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 RP1L1Q8IWN7 2480 aaPredicted RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 FGF6P10767 208 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 MEF2CQ06413 473 aaPredicted RBP11.23□□□□□ -0.61
VPS52-212ENST00000445902 OR1L4Q8NGR5 311 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 PERPQ96FX8 193 aa11.23□□□□□ -0.61
VPS52-212ENST00000445902 A6NDN8 102 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 FSTL3O95633 263 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 MYCNOSP40205 109 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 IGKV1D-37A0A075B6S9 117 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 hADV38S2A0JD32 116 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 C19orf71A6NCJ1 209 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 H3BRM9 83 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 PLP1P60201 277 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 FA2HQ7L5A8 372 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 ZNF576Q9H609 170 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 PILRBQ9UKJ0 227 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 KBTBD11-OT1A0A1B0GTJ5 212 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 ZNF207O43670 478 aaKnown RBP11.22□□□□□ -0.61
VPS52-212ENST00000445902 FAM87AP0C7U9 286 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 LGALS7P47929 136 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 ERHP84090 104 aaKnown RBP11.22□□□□□ -0.61
VPS52-212ENST00000445902 WT1-ASQ06250 92 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 MSMPQ1L6U9 139 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 SAMD13Q5VXD3 122 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
VPS52-212ENST00000445902 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
VPS52-212ENST00000445902 ADTRPQ96IZ2 230 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms