RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TOMM40O96008 361 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 SELENOTP62341 195 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 KRTAP21-3Q3LHN1 58 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 TOMM20LQ6UXN7 152 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 TMEM182Q6ZP80 229 aaPredicted RBP13.34□□□□□ -0.27
SGCE-206ENST00000445866 C20orf24Q9BUV8 137 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 CYTL1Q9NRR1 136 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 BCL2L11O43521 198 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 FHL3Q13643 280 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 BPIFCQ8NFQ6 507 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 OR51G1Q8NGK1 321 aa13.34□□□□□ -0.27
SGCE-206ENST00000445866 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
SGCE-206ENST00000445866 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
SGCE-206ENST00000445866 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
SGCE-206ENST00000445866 HSD17B11Q8NBQ5 300 aa13.33□□□□□ -0.28
SGCE-206ENST00000445866 RCC1LQ96I51 464 aaKnown RBP13.33□□□□□ -0.28
SGCE-206ENST00000445866 NPCDR1Q9BY65 106 aa13.33□□□□□ -0.28
SGCE-206ENST00000445866 PARD6GQ9BYG4 376 aaPredicted RBP13.33□□□□□ -0.28
SGCE-206ENST00000445866 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 C4BPBP20851 252 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 OPCMLQ14982 345 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 MIC13Q5XKP0 118 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 GGTLC1Q9BX51 225 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 STAB1Q9NY15 2570 aa13.32□□□□□ -0.28
SGCE-206ENST00000445866 ZNF207O43670 478 aaKnown RBP13.31□□□□□ -0.28
SGCE-206ENST00000445866 CFDP00746 253 aaPredicted RBP13.31□□□□□ -0.28
SGCE-206ENST00000445866 IL4P05112 153 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 ORM2P19652 201 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 RPL29P47914 159 aaKnown RBP13.31□□□□□ -0.28
SGCE-206ENST00000445866 C1QL4Q86Z23 238 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 ZNF414Q96IQ9 312 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 BOLA1Q9Y3E2 137 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 LINC00869P0C866 280 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 LYZP61626 148 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 Q6ZRG5 221 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 STPG3Q8N7X2 389 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 UFC1Q9Y3C8 167 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 RFNGQ9Y644 331 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 PXMP4Q9Y6I8 212 aa13.31□□□□□ -0.28
SGCE-206ENST00000445866 WI2-2373I1.2A0A1W2PRP0 233 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 LGALS9O00182 355 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 TSPAN15O95858 294 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 ATP6V0CP27449 155 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 B2MP61769 119 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 PRR20EP86478 221 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 PRR20CP86479 221 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 PRR20DP86480 221 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 PRR20BP86481 221 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 PRR20AP86496 221 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 SLC39A9Q9NUM3 307 aa13.3□□□□□ -0.28
SGCE-206ENST00000445866 OVOL1O14753 267 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 NPPCP23582 126 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 EIF5AP63241 154 aaKnown RBP13.29□□□□□ -0.28
SGCE-206ENST00000445866 REC114Q7Z4M0 266 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 OR1B1Q8NGR6 318 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 GNPNAT1Q96EK6 184 aaPredicted RBP13.29□□□□□ -0.28
SGCE-206ENST00000445866 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 DOK5Q9P104 306 aa13.29□□□□□ -0.28
SGCE-206ENST00000445866 HYPMO75409 117 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 SLC51BQ86UW2 128 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 LINC00482Q8N8I6 264 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 OR9G4Q8NGQ1 327 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 KCNIP2Q9NS61 270 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 PEMTQ9UBM1 199 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 K7EMT4 169 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 OR5G3P0C626 314 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 USF2Q15853 346 aaPredicted RBP13.28□□□□□ -0.28
SGCE-206ENST00000445866 FFAR4Q5NUL3 377 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 METTL26Q96S19 204 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 SH3BGRL3Q9H299 93 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 SLC25A32Q9H2D1 315 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SGCE-206ENST00000445866 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
SGCE-206ENST00000445866 TPT1P13693 172 aaKnown RBP13.27□□□□□ -0.29
SGCE-206ENST00000445866 ELLP55199 621 aaPredicted RBP13.27□□□□□ -0.29
SGCE-206ENST00000445866 OR2G3Q8NGZ4 309 aa13.27□□□□□ -0.29
SGCE-206ENST00000445866 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
SGCE-206ENST00000445866 RABAC1Q9UI14 185 aa13.27□□□□□ -0.29
SGCE-206ENST00000445866 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 COX7A2P2O60397 106 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 PLP1P60201 277 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 PXDC1Q5TGL8 231 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
SGCE-206ENST00000445866 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
SGCE-206ENST00000445866 IGHV3OR16-13A0A075B7E8 117 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
SGCE-206ENST00000445866 IGHV3-74A0A0B4J1X5 117 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms