RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TRAV6A0A075B6T7 132 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 KIR2DL5BA0A0G2JN68 375 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 KIR2DL5BA0A0G2JPC4 375 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 WRBO00258 174 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 FABP1P07148 127 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 H2AFB2P0C5Z0 115 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 IAPPP10997 89 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 DEFB131AP59861 70 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-203ENST00000444440 PAFAH1B2P68402 229 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 ID3Q02535 119 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 USF2Q15853 346 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-203ENST00000444440 KIR2DL5AQ8N109 375 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 KIR2DL5BQ8NHK3 375 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 MITD1Q8WV92 249 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 NPIPB3Q92617 1050 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 ACY3Q96HD9 319 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 SLC35E1Q96K37 410 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 METTL26Q96S19 204 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 PAIP2BQ9ULR5 123 aaKnown RBP7.98□□□□□ -1.13
SF3A1-203ENST00000444440 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 U3KQE9 123 aa7.98□□□□□ -1.13
SF3A1-203ENST00000444440 K7EQG2 157 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 ADAP1O75689 374 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 UPK1BO75841 260 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-203ENST00000444440 P2RY1P47900 373 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 ASAH1Q13510 395 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 PMS2P11Q13670 270 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 GSG1LQ6UXU4 331 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 DCANP1Q8TF63 244 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 GRAMD2BQ96HH9 432 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 NUDT15Q9NV35 164 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 PFDN2Q9UHV9 154 aa7.97□□□□□ -1.13
SF3A1-203ENST00000444440 STRAPQ9Y3F4 350 aaKnown RBP7.97□□□□□ -1.13
SF3A1-203ENST00000444440 IGKV1D-37A0A075B6S9 117 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 UBE2CO00762 179 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 GIG44P09565 113 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 RD3LP0DJH9 198 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 EIF2B2P49770 351 aaKnown RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 RPL11P62913 178 aaKnown RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 GAMTQ14353 236 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 IAH1Q2TAA2 248 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 SPANXN5Q5MJ07 72 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 STPG3Q8N7X2 389 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 STXBP6Q8NFX7 210 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 ENKURQ8TC29 256 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 ZNF431Q8TF32 576 aaPredicted RBP7.96□□□□□ -1.14
SF3A1-203ENST00000444440 GLMPQ8WWB7 406 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 CSTL1Q9H114 145 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 GSKIPQ9P0R6 139 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 RABAC1Q9UI14 185 aa7.96□□□□□ -1.14
SF3A1-203ENST00000444440 TRAV2A0A0B4J234 112 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 ZFP92A6NM28 416 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 DEFA1P59665 94 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 DEFA3P59666 94 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 C16orf54Q6UWD8 224 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 C12orf45Q8N5I9 185 aaPredicted RBP7.95□□□□□ -1.14
SF3A1-203ENST00000444440 OR4D5Q8NGN0 318 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 SMIM8Q96KF7 97 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 RAB40CQ96S21 281 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 PSENENQ9NZ42 101 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 TBC1D24Q9ULP9 559 aa7.95□□□□□ -1.14
SF3A1-203ENST00000444440 IGKV1OR2-108A0A075B7D4 117 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 C5orf51A6NDU8 294 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 KNCNA6PVL3 124 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 MPTX1A8MV57 137 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 SCGB1D2O95969 90 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 TOMM40O96008 361 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 IL4P05112 153 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 HNRNPCP07910 306 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 PSG1P11464 419 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 C4BPBP20851 252 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 NUP62P37198 522 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 POLR2GP62487 172 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 ZNF90Q03938 601 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 TRPT1Q86TN4 253 aaKnown RBP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 ZBTB8BQ8NAP8 495 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 OR51G1Q8NGK1 321 aa7.94□□□□□ -1.14
SF3A1-203ENST00000444440 GPN1Q9HCN4 374 aaPredicted RBP7.94□□□□□ -1.14
SF3A1-203ENST00000444440 FAM25EA8MYX2 175 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 PRSS46E5RG02 174 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 DEFB4AO15263 64 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 SSSCA1O60232 199 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 CFDP00746 253 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-203ENST00000444440 CA1P00915 261 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-203ENST00000444440 IL5P05113 134 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 S100A7P31151 101 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 AP2S1P53680 142 aaPredicted RBP7.93□□□□□ -1.14
SF3A1-203ENST00000444440 TAS2R30P59541 319 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 TRGV9Q99603 122 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 SEC22CQ9BRL7 303 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 DNAH2Q9P225 4427 aa7.93□□□□□ -1.14
SF3A1-203ENST00000444440 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
SF3A1-203ENST00000444440 HELTA6NFD8 242 aa7.92□□□□□ -1.14
SF3A1-203ENST00000444440 L7N2F9 121 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms