RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 Q8NFD4 153 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 EML5Q05BV3 1969 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 VN1R17PQ8TDU5 208 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 SH3BGRL3Q9H299 93 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 GPX1P07203 203 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 SUPT4H1P63272 117 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 RELBQ01201 579 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 UQCR10Q9UDW1 63 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 EML6Q6ZMW3 1958 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 NUP210LQ5VU65 1888 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 SAP30O75446 220 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 C2orf83Q53S99 150 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 Q6ZSR3 168 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 ZNF833PQ6ZTB9 187 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 MAP1LC3CQ9BXW4 147 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 HIVEP3Q5T1R4 2406 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 ICAM4Q14773 271 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 SPSB3Q6PJ21 355 aa11.41□□□□□ -0.58
SMARCA4-204ENST00000444061 SNURFLB1AK76 121 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 LDLRAD2Q5SZI1 272 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 TMEM183AQ8IXX5 376 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 F11RQ9Y624 299 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 OR4D5Q8NGN0 318 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 RPRMQ9NS64 109 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 A0A087WWC5 75 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 A0A1B0GV90 55 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 GCHFRP30047 84 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 CAMPP49913 170 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 HIST2H2BCQ6DN03 193 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 LRRC75A-AS1Q8N1F1 130 aa11.4□□□□□ -0.58
SMARCA4-204ENST00000444061 NMSQ5H8A3 153 aa11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 SPANXN1Q5VSR9 72 aa11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.59
SMARCA4-204ENST00000444061 ATP6V0E1O15342 81 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 CIDEAO60543 219 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 OR5AL1P0C617 328 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 HOXA5P20719 270 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 TCL1AP56279 114 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 ATG2AQ2TAZ0 1938 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 NDUFB4O95168 129 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 PCP4P48539 62 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 GPR82Q96P67 336 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 LINC00587B1AMM8 73 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 TRBV7-1A0A0A6YYK4 115 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 ISLRO14498 428 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 CD33P20138 364 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 ANOS1P23352 680 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 DSCAMO60469 2012 aa11.39□□□□□ -0.59
SMARCA4-204ENST00000444061 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 A0A1B0GWJ7 208 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 ATRAIDQ6UW56 229 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 APCSP02743 223 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 RIGQ13278 110 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 AREGP15514 252 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 IER3P46695 156 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 ZNF506Q5JVG8 444 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 LY6G6FQ5SQ64 297 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 FGF16O43320 207 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 FOLR2P14207 255 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 GTSCR1Q86UQ5 136 aa11.38□□□□□ -0.59
SMARCA4-204ENST00000444061 FOXI3A8MTJ6 420 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 CNTFRP26992 372 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 VPREB3Q9UKI3 123 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 UBE2CO00762 179 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 IGHV4-59P01825 116 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 RCC1LQ96I51 464 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 CRYBB3P26998 211 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 RPL13AP40429 203 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 ZNF134P52741 427 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 PCNTO95613 3336 aa11.37□□□□□ -0.59
SMARCA4-204ENST00000444061 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms