RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 HILPDAQ9Y5L2 63 aa2.23□□□□□ -2.05
LINC00393-201ENST00000443621 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
LINC00393-201ENST00000443621 CACNA1BQ00975 2339 aa2.23□□□□□ -2.05
LINC00393-201ENST00000443621 ARID1AO14497 2285 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ASH1LQ9NR48 2969 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 MYO18BQ8IUG5 2567 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 A0A087X0K7 114 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 A0A1W2PS18 150 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 MEX3AA1L020 520 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 C7orf77A4D0Y5 90 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 RBAKDNA6NC62 111 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 HELTA6NFD8 242 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 NCBP2LA6PVI3 153 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 C9JQL5 133 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 H3BRN7 92 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 K7EMT4 169 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 K7EQM0 130 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 DNASE2O00115 360 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 BMPR1BO00238 502 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 FCN1O00602 326 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ISLRO14498 428 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 NUPL2O15504 423 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 GNG7O60262 68 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PAGE4O60829 102 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 NXPH3O95157 252 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SCGB1D1O95968 90 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 IGKV1-17P01599 117 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 TYMSP04818 313 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ELANEP08246 267 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CTSGP08311 255 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 NBEAP1P0C6P0 100 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 EGR2P11161 476 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PSG1P11464 419 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 S100PP25815 95 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CNTFRP26992 372 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 BMI1P35226 326 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 IER3P46695 156 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 MFAP2P55001 183 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SRSF3P84103 164 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PSG9Q00887 426 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SRSF2Q01130 221 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 FLI1Q01543 452 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CFHR3Q02985 330 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 HAGHQ16775 308 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 AWAT1Q58HT5 328 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CT83Q5H943 113 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ASPHD1Q5U4P2 390 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 FAM122CQ6P4D5 195 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 KCNIP4Q6PIL6 250 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PET117Q6UWS5 81 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PATE2Q6UY27 113 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 Q6YL49 198 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 LINC00305Q7Z4B0 112 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 GPHB5Q86YW7 130 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 DYNAPQ8N1N2 210 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 Q8N2B8 174 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 C5orf17Q8NAS9 161 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 OR4F5Q8NH21 305 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 C2CD4CQ8TF44 421 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 EEF1AKMT3Q96AZ1 226 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 FXYD5Q96DB9 178 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 MRPL53Q96EL3 112 aaKnown RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 RNF125Q96EQ8 232 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ACY3Q96HD9 319 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 FMC1Q96HJ9 113 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 YPEL4Q96NS1 127 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 OR4F4Q96R69 305 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 RARRES2Q99969 163 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SLC50A1Q9BRV3 221 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PAXXQ9BUH6 204 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ELOVL1Q9BW60 279 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SLC25A39Q9BZJ4 359 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PARLQ9H300 379 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 OR51M1Q9H341 326 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 VSIRQ9H7M9 311 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SLC25A22Q9H936 323 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 OTORQ9NRC9 128 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 OSTCQ9NRP0 149 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 VPREB3Q9UKI3 123 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 HIGD1AQ9Y241 93 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 ZFP30Q9Y2G7 519 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 SOX21Q9Y651 276 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 U3KQE9 123 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 USP9XQ93008 2570 aaPredicted RBP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 NBASA2RRP1 2371 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CRYBG3Q68DQ2 2970 aa2.22□□□□□ -2.05
LINC00393-201ENST00000443621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.22□□□□□ -2.05
LINC00393-201ENST00000443621 CELSR2Q9HCU4 2923 aa2.21□□□□□ -2.05
LINC00393-201ENST00000443621 TRBV19A0A075B6N1 114 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 IGHV3-72A0A0B4J1Y9 119 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 TRAV41A0A0B4J266 112 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 TRAV40A0A0B4J280 105 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 A0A0U1RQK1 487 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 ZNF320A2RRD8 509 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 ZNF98A6NK75 572 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 COLCA2A8K830 154 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 ZNF785A8K8V0 405 aa2.21□□□□□ -2.06
LINC00393-201ENST00000443621 F8W735 103 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms