RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CST7O76096 145 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
CCDC39-201ENST00000442201 SPANXN5Q5MJ07 72 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 NEGR1Q7Z3B1 354 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 FER1L6-AS1Q8NA97 138 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 ZDHHC16Q969W1 377 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 TCF19Q9Y242 345 aa6.49□□□□□ -1.37
CCDC39-201ENST00000442201 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 CCL20P78556 96 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 PDLIM3Q53GG5 364 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 SPINK9Q5DT21 86 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR4A5Q8NH83 315 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM167AQ8TBQ9 72 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 CACNG8Q8WXS5 425 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 RNF5Q99942 180 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 ZNF257Q9Y2Q1 563 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 A0A096LNT2 108 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR11H12B2RN74 326 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 GNG7O60262 68 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 NUPR1O60356 82 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 GATA3P23771 443 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 RPL15P61313 204 aaKnown RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 RPL8P62917 257 aaKnown RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 LOXL1Q08397 574 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 Q6ZN92 141 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM217Q8N7C4 229 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR11H1Q8NG94 326 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR4F17Q8NGA8 305 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR11H2Q8NH07 326 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 DPF1Q92782 380 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 UHRF2Q96PU4 802 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR4F4Q96R69 305 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 COMMD5Q9GZQ3 224 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 HEYLQ9NQ87 328 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 HIF1ANQ9NWT6 349 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 OR51B2Q9Y5P1 312 aa6.48□□□□□ -1.37
CCDC39-201ENST00000442201 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
CCDC39-201ENST00000442201 BORCS7-ASMTA0A0B4J1R7 106 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 RNF223E7ERA6 249 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 VENTXO95231 258 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 IGLV2-23P01705 113 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 IGLC1P0CG04 106 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 SAA4P35542 130 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM267Q0VDI3 215 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-201ENST00000442201 MTURNQ8N3F0 131 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 LINC01356Q8N9X3 169 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 TEX45Q8NA69 505 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 OR5C1Q8NGR4 320 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 OR1N2Q8NGR9 330 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 CFHR4Q92496 578 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 C1orf159Q96HA4 380 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 RITA1Q96K30 269 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 HINT2Q9BX68 163 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 C7orf69Q9H7B7 122 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 ENY2Q9NPA8 101 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 CENPVL3A0A0U1RRI6 287 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 NPFFO15130 113 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 AZU1P20160 251 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 TPPP2P59282 170 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 CKS1BP61024 79 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 SPATA45Q537H7 98 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM256Q8N2U0 113 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 WNK2Q9Y3S1 2297 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 LOC102723971A0A1B0GUV8 181 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 DYNLT3P51808 116 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 HBG1P69891 147 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 HBG2P69892 147 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 HES1Q14469 280 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 ZNF266Q14584 549 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 PSG5Q15238 335 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 TMEM14EPQ6UXP3 125 aa6.47□□□□□ -1.37
CCDC39-201ENST00000442201 ACTL6BO94805 426 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 MOSP00540 346 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 IGKV1D-33P01593 117 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 IGKV1-33P01594 117 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 STAG3L2P0CL84 134 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 MYOD1P15172 320 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 VDAC2P45880 294 aaPredicted RBP6.46□□□□□ -1.37
CCDC39-201ENST00000442201 LINC00310P59036 64 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 PRCDQ00LT1 54 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 DYNAPQ8N1N2 210 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 OR1L8Q8NGR8 309 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 Q96MF0 132 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 PLEKHA3Q9HB20 300 aa6.46□□□□□ -1.37
CCDC39-201ENST00000442201 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 TRAV40A0A0B4J280 105 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 IGHV1-69DA0A0B4J2H0 117 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 TEX50A0A1B0GTY4 177 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 MT-CO2P00403 227 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 IGHV1-69P01742 117 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 CNTFRP26992 372 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 HINT1P49773 126 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-201ENST00000442201 SSBP2P81877 361 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-201ENST00000442201 MMD2Q8IY49 270 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 KLHDC1Q8N7A1 406 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 C5orf17Q8NAS9 161 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 MAPK1IP1LQ8NDC0 245 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 OR2T10Q8NGZ9 312 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms