RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 ACY3Q96HD9 319 aa12.83□□□□□ -0.36
HDLBP-218ENST00000441124 C17orf77Q96MU5 243 aa12.83□□□□□ -0.36
HDLBP-218ENST00000441124 ABHD1Q96SE0 405 aa12.83□□□□□ -0.36
HDLBP-218ENST00000441124 FAM229AH3BQW9 127 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 IFNA5P01569 189 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 HLA-DMAP28067 261 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 SDC2P34741 201 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 HRH1P35367 487 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 LINC00315P59091 139 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
HDLBP-218ENST00000441124 A0A0J9YX75 114 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 CBY3A6NI87 242 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 EBAG9O00559 213 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 TOMM40O96008 361 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 SLC25A4P12235 298 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 AQP4P55087 323 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 PAX9P55771 341 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 SCAND1P57086 179 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 OR5I1Q13606 314 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
HDLBP-218ENST00000441124 NPIPB3Q92617 1050 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 FCGR1BQ92637 280 aa12.81□□□□□ -0.36
HDLBP-218ENST00000441124 GNPNAT1Q96EK6 184 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-218ENST00000441124 VPS13BQ7Z7G8 4022 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 M0R2Z0 102 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 INSP01308 110 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 PSG1P11464 419 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 NUP62P37198 522 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-218ENST00000441124 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 HAMPP81172 84 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 Q6ZSN1 163 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-218ENST00000441124 DOK5Q9P104 306 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 SSR3Q9UNL2 185 aa12.8□□□□□ -0.36
HDLBP-218ENST00000441124 A0A0J9YY99 117 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 PGAM2P15259 253 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 AZU1P20160 251 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 PSMB9P28065 219 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 HTR2BP41595 481 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 ICAM4Q14773 271 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 TMEM69Q5SWH9 247 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 RNF125Q96EQ8 232 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 RPRMQ9NS64 109 aa12.79□□□□□ -0.36
HDLBP-218ENST00000441124 TRAV26-1A0A087WT03 109 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 SOCS3O14543 225 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 ATG12O94817 140 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 HTN1P15515 57 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 ESRGQ1W209 222 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 TRIM16LQ309B1 348 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 PPP1R14BQ96C90 147 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 ANAPC10Q9UM13 185 aa12.78□□□□□ -0.36
HDLBP-218ENST00000441124 ISLRO14498 428 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 P0C879 139 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 NAT1P18440 290 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 PI3P19957 117 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 AMTNQ6UX39 209 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 LYSMD2Q8IV50 215 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 BAP18Q8IXM2 172 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 RRNAD1Q96FB5 475 aaKnown RBP12.77□□□□□ -0.37
HDLBP-218ENST00000441124 S100A16Q96FQ6 103 aaKnown RBP12.77□□□□□ -0.37
HDLBP-218ENST00000441124 C16orf92Q96LL3 132 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 C20orf173Q96LM9 149 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 TP53RKQ96S44 253 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 UPK3BQ9BT76 320 aa12.77□□□□□ -0.37
HDLBP-218ENST00000441124 PLAC8L1A1L4L8 177 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 NXPH3O95157 252 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 ELK1P19419 428 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 TSPOP30536 169 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 ETFRF1Q6IPR1 90 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 Q6ZRN7 208 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-218ENST00000441124 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
HDLBP-218ENST00000441124 LINC01587Q99440 93 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 BLOC1S6Q9UL45 172 aa12.76□□□□□ -0.37
HDLBP-218ENST00000441124 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
HDLBP-218ENST00000441124 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 SPCS3P61009 180 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 LYZP61626 148 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 B2MP61769 119 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
HDLBP-218ENST00000441124 SPARTQ8N0X7 666 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 SLC24A4Q8NFF2 622 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
HDLBP-218ENST00000441124 TRAV12-2A0A075B6T6 113 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 LOC100506127A0A0U1RQW1 187 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 CEBPZOSA8MTT3 80 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 CRXO43186 299 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-218ENST00000441124 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 M6PRP20645 277 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 PRSS3P35030 304 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 CNN1P51911 297 aaKnown RBP12.74□□□□□ -0.37
HDLBP-218ENST00000441124 UCP3P55916 312 aa12.74□□□□□ -0.37
HDLBP-218ENST00000441124 SUPT4H1P63272 117 aaKnown RBP12.74□□□□□ -0.37
HDLBP-218ENST00000441124 SP6Q3SY56 376 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms