RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 DEFB135Q30KP9 77 aa10.15□□□□□ -0.78
LTBR-202ENST00000440421 LEMD1Q68G75 181 aa10.15□□□□□ -0.78
LTBR-202ENST00000440421 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 K7EQG2 157 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 SSSCA1O60232 199 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 EIF2B2P49770 351 aaKnown RBP10.14□□□□□ -0.79
LTBR-202ENST00000440421 ID3Q02535 119 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 OR2F1Q13607 317 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 IAH1Q2TAA2 248 aaPredicted RBP10.14□□□□□ -0.79
LTBR-202ENST00000440421 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 OR4D5Q8NGN0 318 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 MITD1Q8WV92 249 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 S100ZQ8WXG8 99 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 RNF125Q96EQ8 232 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 NUDT15Q9NV35 164 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 GSKIPQ9P0R6 139 aa10.14□□□□□ -0.79
LTBR-202ENST00000440421 STRAPQ9Y3F4 350 aaKnown RBP10.14□□□□□ -0.79
LTBR-202ENST00000440421 KIR2DL5BA0A0G2JN68 375 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 KIR2DL5BA0A0G2JPC4 375 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 HELTA6NFD8 242 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 PRSS46E5RG02 174 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 UBE2CO00762 179 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 SPRY2O43597 315 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 FABP1P07148 127 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 ZNF688P0C7X2 276 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 LYZP61626 148 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 LINC00299Q6ZSB3 139 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 Q6ZWC4 215 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 KIR2DL5AQ8N109 375 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 SEC22CQ9BRL7 303 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 PSENENQ9NZ42 101 aa10.13□□□□□ -0.79
LTBR-202ENST00000440421 IGKV1OR2-108A0A075B7D4 117 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 CCSO14618 274 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 BUB3O43684 328 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 AP2S1P53680 142 aaPredicted RBP10.12□□□□□ -0.79
LTBR-202ENST00000440421 AKR1C1Q04828 323 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 ZBTB8BQ8NAP8 495 aaPredicted RBP10.12□□□□□ -0.79
LTBR-202ENST00000440421 DCANP1Q8TF63 244 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 TRGV9Q99603 122 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 TBC1D24Q9ULP9 559 aa10.12□□□□□ -0.79
LTBR-202ENST00000440421 FAM240BA0A1B0GVZ2 78 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 SMCO3A2RU48 225 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 SNRPGP15A8MWD9 76 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 FAM25EA8MYX2 175 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 OR8G2PQ6IF36 304 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 SIGLEC15Q6ZMC9 328 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 ACOT7LQ6ZUV0 252 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 RNF183Q96D59 192 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 TP53TG1Q9Y2A0 90 aa10.11□□□□□ -0.79
LTBR-202ENST00000440421 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 CCNKO75909 580 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 PAX9P55771 341 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 ZNF846Q147U1 533 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 MZT2BQ6NZ67 158 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 STHQ8IWL8 128 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 ZNF431Q8TF32 576 aaPredicted RBP10.1□□□□□ -0.79
LTBR-202ENST00000440421 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 SMIM8Q96KF7 97 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 PFDN2Q9UHV9 154 aa10.1□□□□□ -0.79
LTBR-202ENST00000440421 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 C5orf51A6NDU8 294 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 MBPP02686 304 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 METTL15P1P0C7V9 234 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 GATA2P23769 480 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 NUP62P37198 522 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 ASAH1Q13510 395 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 C12orf45Q8N5I9 185 aaPredicted RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
LTBR-202ENST00000440421 RCL1Q9Y2P8 373 aaKnown RBP10.09□□□□□ -0.79
LTBR-202ENST00000440421 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
LTBR-202ENST00000440421 UPK1BO75841 260 aa10.08□□□□□ -0.8
LTBR-202ENST00000440421 ACTL10Q5JWF8 245 aa10.08□□□□□ -0.8
LTBR-202ENST00000440421 GSG1LQ6UXU4 331 aa10.08□□□□□ -0.8
LTBR-202ENST00000440421 TMEM182Q6ZP80 229 aaPredicted RBP10.08□□□□□ -0.8
LTBR-202ENST00000440421 KMT2CQ8NEZ4 4911 aaKnown RBP10.07□□□□□ -0.8
LTBR-202ENST00000440421 L7N2F9 121 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 CFDP00746 253 aaPredicted RBP10.07□□□□□ -0.8
LTBR-202ENST00000440421 ORM2P19652 201 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 VAMP2P63027 116 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 IFITM3Q01628 133 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 EWSR1Q01844 656 aaKnown RBP eCLIP10.07□□□□□ -0.8
LTBR-202ENST00000440421 TMEM14EPQ6UXP3 125 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 TMEM144Q7Z5S9 345 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
LTBR-202ENST00000440421 BPIFCQ8NFQ6 507 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 OR10P1Q8NGE3 313 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 ENKURQ8TC29 256 aa10.07□□□□□ -0.8
LTBR-202ENST00000440421 LSM5Q9Y4Y9 91 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms