RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF431Q8TF32 576 aaPredicted RBP17.54■□□□□ 0.4
VARS-217ENST00000440048 DNASE2O00115 360 aaPredicted RBP17.53■□□□□ 0.4
VARS-217ENST00000440048 SSSCA1O60232 199 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 CMC4P56277 68 aaPredicted RBP17.53■□□□□ 0.4
VARS-217ENST00000440048 ZNF90Q03938 601 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 APRG1Q8IVJ8 170 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 GRAMD2BQ96HH9 432 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 PSENENQ9NZ42 101 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 GSKIPQ9P0R6 139 aa17.53■□□□□ 0.4
VARS-217ENST00000440048 TRAV2A0A0B4J234 112 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 CCSO14618 274 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 SCGB1D2O95969 90 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 IFITM3Q01628 133 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 OR51G1Q8NGK1 321 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 SMIM8Q96KF7 97 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 MAP6D1Q9H9H5 199 aa17.52■□□□□ 0.4
VARS-217ENST00000440048 ZNF124Q15973 351 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 C16orf54Q6UWD8 224 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 THAP8Q8NA92 274 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 RNF125Q96EQ8 232 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 TRGV9Q99603 122 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 RABAC1Q9UI14 185 aa17.51■□□□□ 0.39
VARS-217ENST00000440048 IGKV1OR2-108A0A075B7D4 117 aa17.5■□□□□ 0.39
VARS-217ENST00000440048 PAX9P55771 341 aa17.5■□□□□ 0.39
VARS-217ENST00000440048 C12orf45Q8N5I9 185 aaPredicted RBP17.5■□□□□ 0.39
VARS-217ENST00000440048 STXBP6Q8NFX7 210 aa17.5■□□□□ 0.39
VARS-217ENST00000440048 GLMPQ8WWB7 406 aa17.5■□□□□ 0.39
VARS-217ENST00000440048 EDA2RQ9HAV5 297 aa17.5■□□□□ 0.39
VARS-217ENST00000440048 FABP1P07148 127 aa17.49■□□□□ 0.39
VARS-217ENST00000440048 FAM24BQ8N5W8 94 aa17.49■□□□□ 0.39
VARS-217ENST00000440048 MUC7Q8TAX7 377 aa17.49■□□□□ 0.39
VARS-217ENST00000440048 RAB40CQ96S21 281 aa17.49■□□□□ 0.39
VARS-217ENST00000440048 PBDC1Q9BVG4 233 aa17.49■□□□□ 0.39
VARS-217ENST00000440048 RCL1Q9Y2P8 373 aaKnown RBP17.49■□□□□ 0.39
VARS-217ENST00000440048 K7EQG2 157 aa17.48■□□□□ 0.39
VARS-217ENST00000440048 MBPP02686 304 aaPredicted RBP17.48■□□□□ 0.39
VARS-217ENST00000440048 RPL35AP18077 110 aaKnown RBP17.48■□□□□ 0.39
VARS-217ENST00000440048 APOC4P55056 127 aa17.48■□□□□ 0.39
VARS-217ENST00000440048 OR2F1Q13607 317 aa17.48■□□□□ 0.39
VARS-217ENST00000440048 ACOT7LQ6ZUV0 252 aa17.48■□□□□ 0.39
VARS-217ENST00000440048 ENKURQ8TC29 256 aa17.48■□□□□ 0.39
VARS-217ENST00000440048 HELTA6NFD8 242 aa17.47■□□□□ 0.39
VARS-217ENST00000440048 PMS2P5A8MQ11 134 aa17.47■□□□□ 0.39
VARS-217ENST00000440048 FAM25EA8MYX2 175 aa17.47■□□□□ 0.39
VARS-217ENST00000440048 BUB3O43684 328 aa17.47■□□□□ 0.39
VARS-217ENST00000440048 EIF2B2P49770 351 aaKnown RBP17.47■□□□□ 0.39
VARS-217ENST00000440048 OR8G2PQ6IF36 304 aa17.47■□□□□ 0.39
VARS-217ENST00000440048 C5orf51A6NDU8 294 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 SNRPGP15A8MWD9 76 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 CCNKO75909 580 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 IL5P05113 134 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 TAS2R30P59541 319 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 DEFB131AP59861 70 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 LYZP61626 148 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 TMEM14EPQ6UXP3 125 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 DCANP1Q8TF63 244 aa17.46■□□□□ 0.39
VARS-217ENST00000440048 KIR2DL5BA0A0G2JN68 375 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 KIR2DL5BA0A0G2JPC4 375 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 TSC22D2O75157 780 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 METTL15P1P0C7V9 234 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 AP2S1P53680 142 aaPredicted RBP17.45■□□□□ 0.38
VARS-217ENST00000440048 AKR1C1Q04828 323 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 KIR2DL5AQ8N109 375 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 KIR2DL5BQ8NHK3 375 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 OVOL2Q9BRP0 275 aa17.45■□□□□ 0.38
VARS-217ENST00000440048 UBE2CO00762 179 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 NUP62P37198 522 aaPredicted RBP17.44■□□□□ 0.38
VARS-217ENST00000440048 LEMD1Q68G75 181 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 TMEM144Q7Z5S9 345 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 STPG3Q8N7X2 389 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 C2orf50Q96LR7 162 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 PFDN2Q9UHV9 154 aa17.44■□□□□ 0.38
VARS-217ENST00000440048 SMCO3A2RU48 225 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 C7orf66A4D0T2 115 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 SIGLEC15Q6ZMC9 328 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 Q6ZWC4 215 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 NRARPQ7Z6K4 114 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 AGRNO00468 2067 aa17.43■□□□□ 0.38
VARS-217ENST00000440048 K7EPK0 472 aa17.42■□□□□ 0.38
VARS-217ENST00000440048 CFDP00746 253 aaPredicted RBP17.42■□□□□ 0.38
VARS-217ENST00000440048 ZNF688P0C7X2 276 aa17.42■□□□□ 0.38
VARS-217ENST00000440048 RRAS2P62070 204 aaPredicted RBP17.42■□□□□ 0.38
VARS-217ENST00000440048 DLK1P80370 383 aa17.42■□□□□ 0.38
VARS-217ENST00000440048 TMEM182Q6ZP80 229 aaPredicted RBP17.42■□□□□ 0.38
VARS-217ENST00000440048 LSM5Q9Y4Y9 91 aaKnown RBP17.42■□□□□ 0.38
VARS-217ENST00000440048 LYL1P12980 280 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 GATA2P23769 480 aaPredicted RBP17.41■□□□□ 0.38
VARS-217ENST00000440048 DEFB135Q30KP9 77 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 CASC10Q5T4H9 136 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 GSG1LQ6UXU4 331 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 OR10P1Q8NGE3 313 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 GPN1Q9HCN4 374 aaPredicted RBP17.41■□□□□ 0.38
VARS-217ENST00000440048 NRN1Q9NPD7 142 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 TP53TG1Q9Y2A0 90 aa17.41■□□□□ 0.38
VARS-217ENST00000440048 L7N2F9 121 aa17.4■□□□□ 0.38
VARS-217ENST00000440048 SPRY2O43597 315 aa17.4■□□□□ 0.38
VARS-217ENST00000440048 VAMP2P63027 116 aa17.4■□□□□ 0.38
VARS-217ENST00000440048 ARL16Q0P5N6 197 aa17.4■□□□□ 0.38
VARS-217ENST00000440048 BPIFCQ8NFQ6 507 aa17.4■□□□□ 0.38
VARS-217ENST00000440048 PPP1R14BQ96C90 147 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms