RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NOL4LQ96MY1 436 aaPredicted RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 RBM14Q96PK6 669 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TBX15Q96SF7 602 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 SLC35D1Q9NTN3 355 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV3-72A0A0B4J1Y9 119 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 J3QR06 171 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 RRHO14718 337 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 LIPFP07098 398 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 CT45A6P0DMU7 189 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 CT45A5P0DMU8 189 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 CT45A7P0DMV0 189 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 CEBPGP53567 150 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 TAS2R60P59551 318 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 PKIAP61925 76 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 GNB1P62873 340 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 CD69Q07108 199 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 JOSD1Q15040 202 aaPredicted RBP3.8□□□□□ -1.8
EDEM3-203ENST00000439962 OR2B11Q5JQS5 317 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 C9orf152Q5JTZ5 239 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 WDR73Q6P4I2 378 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 KIR3DL3Q8N743 410 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 STPG3Q8N7X2 389 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM18Q96B42 140 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 OSTCQ9NRP0 149 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 NDUFA4L2Q9NRX3 87 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 FBN3Q75N90 2809 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 IFITM10A6NMD0 228 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 H3BUX3 64 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 LINC00869P0C866 280 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 ARL14EPLP0DKL9 152 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 RPL15P61313 204 aaKnown RBP3.8□□□□□ -1.8
EDEM3-203ENST00000439962 RPL39P5Q59GN2 51 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 TEX45Q8NA69 505 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 OR10X1Q8NGY0 326 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 C8orf46Q8TAG6 207 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 COMMD5Q9GZQ3 224 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 IL36BQ9NZH7 164 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 WASHC3Q9Y3C0 194 aa3.8□□□□□ -1.8
EDEM3-203ENST00000439962 TEX50A0A1B0GTY4 177 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 H0YJW9 148 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 CA2P00918 260 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 RNASE2P10153 161 aaKnown RBP3.79□□□□□ -1.8
EDEM3-203ENST00000439962 DLX6P56179 175 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 BPIFB3P59826 476 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
EDEM3-203ENST00000439962 PAFAH1B2P68402 229 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 PAX8Q06710 450 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM95Q3KNT9 176 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 VMA21Q3ZAQ7 101 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 FAM231DQ6ZW35 169 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 OR10G8Q8NGN5 311 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 OR9G1Q8NH87 305 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 ST6GALNAC6Q969X2 333 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 LINC00527Q9UJ94 153 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 AMMECR1Q9Y4X0 333 aaPredicted RBP3.79□□□□□ -1.8
EDEM3-203ENST00000439962 TSTD3H0UI37 97 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 ISLRO14498 428 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 SLC31A2O15432 143 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 NPPCP23582 126 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 PRTN3P24158 256 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 CNN1P51911 297 aaKnown RBP3.79□□□□□ -1.8
EDEM3-203ENST00000439962 PLP1P60201 277 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 HES1Q14469 280 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 PYY3Q5JQD4 70 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 KHDC1LQ5JSQ8 128 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 TEX38Q6PEX7 206 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 TOMM20LQ6UXN7 152 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 C1orf122Q6ZSJ8 110 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 SLC16A13Q7RTY0 426 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 BEND2Q8NDZ0 799 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 OR1L6Q8NGR2 347 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 FLYWCH2Q96CP2 140 aaKnown RBP3.79□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BLQ99880 126 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 GNB1LQ9BYB4 327 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 RNF24Q9Y225 148 aa3.79□□□□□ -1.8
EDEM3-203ENST00000439962 TET2Q6N021 2002 aaPredicted RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1W2PRX2 142 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 REG1AP05451 166 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 CRYGCP07315 174 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 Q0VG73 95 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 DIAPH2-AS1Q14236 149 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 CST9LP1Q5W188 147 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 MIC13Q5XKP0 118 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 DYNAPQ8N1N2 210 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 OR4P4Q8NGL7 312 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 WIPF2Q8TF74 440 aaPredicted RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 NABP2Q9BQ15 211 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
EDEM3-203ENST00000439962 URGCP-MRPS24S4R325 110 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV1-69DA0A0B4J2H0 117 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 TCRBV4S1A1TA0A5B7 111 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 XKRY2A2RUG3 117 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 NPFFO15130 113 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 NDUFB4O95168 129 aa3.78□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV1-69P01742 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms