RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
CCDC188-201ENST00000439765 SMIM3Q9BZL3 60 aa13.4□□□□□ -0.26
CCDC188-201ENST00000439765 SIGLEC8Q9NYZ4 499 aa13.4□□□□□ -0.26
CCDC188-201ENST00000439765 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
CCDC188-201ENST00000439765 FBXL17Q9UF56 701 aa13.4□□□□□ -0.26
CCDC188-201ENST00000439765 NUPL2O15504 423 aaKnown RBP13.39□□□□□ -0.27
CCDC188-201ENST00000439765 GNG7O60262 68 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC188-201ENST00000439765 FOLR2P14207 255 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 CLINT1Q14677 625 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 VWC2Q2TAL6 325 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 C9orf62Q8N4C0 152 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 OR4X1Q8NH49 305 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 TMEM190Q8WZ59 177 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 TMEM147Q9BVK8 224 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 WFDC1Q9HC57 220 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 NPVFQ9HCQ7 196 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 UQCC1Q9NVA1 299 aa13.39□□□□□ -0.27
CCDC188-201ENST00000439765 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
CCDC188-201ENST00000439765 IZUMO1RA6ND01 250 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 CTSGP08311 255 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 FCGR2BP31994 310 aaPredicted RBP13.38□□□□□ -0.27
CCDC188-201ENST00000439765 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 ACY3Q96HD9 319 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 TXN2Q99757 166 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 ATP5SQ99766 215 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 C20orf24Q9BUV8 137 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 ARL6Q9H0F7 186 aa13.38□□□□□ -0.27
CCDC188-201ENST00000439765 SMCO3A2RU48 225 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 TAAR5O14804 337 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 DFFBO76075 338 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 CBLN1P23435 193 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 NPBWR1P48145 328 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 LCN12Q6JVE5 192 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 NPIPB3Q92617 1050 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 NBEAL2Q6ZNJ1 2754 aa13.37□□□□□ -0.27
CCDC188-201ENST00000439765 NDUFA4O00483 81 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 CLN5O75503 358 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 RND2P52198 227 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 RELQ04864 619 aaPredicted RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 ARPC5LQ9BPX5 153 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 KMT2CQ8NEZ4 4911 aaKnown RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 KANTRA0A1W2PQU2 76 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 ZNF207O43670 478 aaKnown RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 NHLRC4P0CG21 123 aaPredicted RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 AKR1C1Q04828 323 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 THAP8Q8NA92 274 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 ZNF414Q96IQ9 312 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 WWC2-AS2Q96NR7 200 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
CCDC188-201ENST00000439765 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 MLXQ9UH92 298 aa13.36□□□□□ -0.27
CCDC188-201ENST00000439765 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 BCL2L11O43521 198 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 YIF1AO95070 293 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 ZNF266Q14584 549 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 DEFB114Q30KQ6 69 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
CCDC188-201ENST00000439765 IGKV1OR2-108A0A075B7D4 117 aa13.34□□□□□ -0.27
CCDC188-201ENST00000439765 TRAV30A0A087WSZ9 112 aa13.34□□□□□ -0.27
CCDC188-201ENST00000439765 IFNA5P01569 189 aa13.34□□□□□ -0.27
CCDC188-201ENST00000439765 OPCMLQ14982 345 aa13.34□□□□□ -0.27
CCDC188-201ENST00000439765 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
CCDC188-201ENST00000439765 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
CCDC188-201ENST00000439765 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 JTBO76095 146 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 IGLC1P0CG04 106 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 C4BPBP20851 252 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 OR10J1P30954 320 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.28
CCDC188-201ENST00000439765 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 MARC2Q969Z3 335 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 PARD6GQ9BYG4 376 aaPredicted RBP13.33□□□□□ -0.28
CCDC188-201ENST00000439765 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
CCDC188-201ENST00000439765 BOLA1Q9Y3E2 137 aa13.33□□□□□ -0.28
CCDC188-201ENST00000439765 BORCS7-ASMTA0A0B4J1R7 106 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 ZFP92A6NM28 416 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 FGF7P21781 194 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 GUCA2BQ16661 112 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 OR2K2Q8NGT1 345 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 SCGB1C1Q8TD33 95 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 TRGV9Q99603 122 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 MRPL27Q9P0M9 148 aaKnown RBP13.32□□□□□ -0.28
CCDC188-201ENST00000439765 SMAD5-AS1Q9Y6J3 95 aa13.32□□□□□ -0.28
CCDC188-201ENST00000439765 MPDU1O75352 247 aa13.31□□□□□ -0.28
CCDC188-201ENST00000439765 IGKV1-17P01599 117 aa13.31□□□□□ -0.28
CCDC188-201ENST00000439765 RAB31Q13636 194 aa13.31□□□□□ -0.28
CCDC188-201ENST00000439765 TIGITQ495A1 244 aa13.31□□□□□ -0.28
CCDC188-201ENST00000439765 MGST2Q99735 147 aa13.31□□□□□ -0.28
CCDC188-201ENST00000439765 ZNF471Q9BX82 626 aaPredicted RBP13.31□□□□□ -0.28
CCDC188-201ENST00000439765 PUS1Q9Y606 427 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms