RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SPANXN3Q5MJ09 141 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 LGALS9CQ6DKI2 356 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 CGB2Q6NT52 195 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 MORN3Q6PF18 240 aaPredicted RBP2.54□□□□□ -2
HMGB1P12-201ENST00000438594 PHF5AQ7RTV0 110 aaKnown RBP2.54□□□□□ -2
HMGB1P12-201ENST00000438594 ORMDL3Q8N138 153 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 LINC00311Q8N616 119 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 SUMF2Q8NBJ7 301 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 OR8D4Q8NGM9 314 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 GTSF1Q8WW33 167 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF414Q96IQ9 312 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 MIEN1Q9BRT3 115 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 SNRNP25Q9BV90 132 aaKnown RBP2.54□□□□□ -2
HMGB1P12-201ENST00000438594 MRPL32Q9BYC8 188 aaKnown RBP2.54□□□□□ -2
HMGB1P12-201ENST00000438594 HEXA-AS1Q9H8Q6 139 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 FGF22Q9HCT0 170 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 RPRMQ9NS64 109 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 CELA1Q9UNI1 258 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF835Q9Y2P0 537 aa2.54□□□□□ -2
HMGB1P12-201ENST00000438594 ADGRB1O14514 1584 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 DIP2CQ9Y2E4 1556 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 FANCAO15360 1455 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 MLH3Q9UHC1 1453 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 IGKV1-9A0A0C4DH69 117 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 PNMA8CA0A1B0GUJ8 204 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 SMIM31A0A1B0GVY4 71 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 OR2T8A6NH00 312 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 A8MWV9 139 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 SRRM5B3KS81 715 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 INS-IGF2F8WCM5 200 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 PHOX2AO14813 284 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 TNFP01375 233 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 TCRAP04437 139 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 PRM2P04554 102 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 GZMBP10144 247 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 ELK1P19419 428 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 DIO3P55073 304 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 RPL30P62888 115 aaKnown RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 HBBP68871 147 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 LINC01554Q52M75 96 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 RNASE13Q5GAN3 156 aaKnown RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 TIFABQ6ZNK6 161 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 LINC00471Q8N535 108 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 TTC9CQ8N5M4 171 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 RNF182Q8N6D2 247 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 DAND5Q8N907 189 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 WFDC11Q8NEX6 87 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 OR8A1Q8NGG7 326 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 WFDC5Q8TCV5 224 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 LCN9Q8WX39 176 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 CIB3Q96Q77 187 aaPredicted RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 SHANK2-AS3Q9BTD1 123 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 PLA2G12AQ9BZM1 189 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 DUSP21Q9H596 190 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 ZNF443Q9Y2A4 671 aaPredicted RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 KLK5Q9Y337 293 aaPredicted RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 AKAP12Q02952 1782 aa2.53□□□□□ -2
HMGB1P12-201ENST00000438594 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 CLTCQ00610 1675 aaKnown RBP2.53□□□□□ -2
HMGB1P12-201ENST00000438594 DIP2BQ9P265 1576 aa2.53□□□□□ -2.01
HMGB1P12-201ENST00000438594 ASXL1Q8IXJ9 1541 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 RGS12O14924 1447 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 KDM6AO15550 1401 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 SCAPERQ9BY12 1400 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 CDK5RAP2Q96SN8 1893 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 PPLO60437 1756 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 KIAA1551Q9HCM1 1747 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 TRBV27A0A0K0K1C4 114 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 M0R129 80 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 C1QAP02745 245 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 SPINK8P0C7L1 97 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF19P17023 458 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 RNASE4P34096 147 aaKnown RBP2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 DYNLT3P51808 116 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 CRISP3P54108 245 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 ARPP19P56211 112 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 TAS2R45P59539 299 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 TMEM258P61165 79 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 C14orf177Q52M58 125 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 AMTNQ6UX39 209 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 IZUMO2Q6UXV1 221 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 AAED1Q7RTV5 226 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 IL36BQ9NZH7 164 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 SMAD5-AS1Q9Y6J3 95 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 KMT2BQ9UMN6 2715 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 MYH7P12883 1935 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 AGLP35573 1532 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 SBF1O95248 1867 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 RALGAPA2Q2PPJ7 1873 aa2.52□□□□□ -2.01
HMGB1P12-201ENST00000438594 NSD3Q9BZ95 1437 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGLV1-50A0A075B6I6 118 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGLV7-46A0A075B6I9 117 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV3-43A0A0B4J1X8 118 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV3-66A0A0C4DH42 116 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV7-4-1A0A0J9YVY3 117 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 A0A1B0GW54 56 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 K7ERJ3 54 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms