RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PFDN1O60925 122 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 PSG1P11464 419 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 FGF7P21781 194 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 S100A7P31151 101 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 CAMLGP49069 296 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 PXDC1Q5TGL8 231 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 TOMM20LQ6UXN7 152 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 SCGB1C1Q8TD33 95 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 ELOVL1Q9BW60 279 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 SMIM3Q9BZL3 60 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 ZFAND3Q9H8U3 227 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 DAZ1Q9NQZ3 744 aaKnown RBP14.07□□□□□ -0.16
HDAC6-208ENST00000438518 SIGLEC8Q9NYZ4 499 aa14.07□□□□□ -0.16
HDAC6-208ENST00000438518 ZNF320A2RRD8 509 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 C17orf112F2Z3M2 114 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 YIF1AO95070 293 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 CD33P20138 364 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 ZNF90Q03938 601 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 S100A7AQ86SG5 101 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 RNF125Q96EQ8 232 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 MGST2Q99735 147 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 ARPC5LQ9BPX5 153 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 NPCDR1Q9BY65 106 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 PFDN2Q9UHV9 154 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 SLC45A2Q9UMX9 530 aa14.06□□□□□ -0.16
HDAC6-208ENST00000438518 BORCS7-ASMTA0A0B4J1R7 106 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 JTBO76095 146 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 IL4P05112 153 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 BMI1P35226 326 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 RPL29P47914 159 aaKnown RBP14.05□□□□□ -0.16
HDAC6-208ENST00000438518 OPCMLQ14982 345 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 UNQ9165/PRO28630Q6UXU0 137 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 ZNF709Q8N972 641 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 RCC1LQ96I51 464 aaKnown RBP14.05□□□□□ -0.16
HDAC6-208ENST00000438518 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 GGTLC1Q9BX51 225 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 GPR61Q9BZJ8 451 aa14.05□□□□□ -0.16
HDAC6-208ENST00000438518 IGHV3-35A0A0C4DH35 117 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 WI2-2373I1.2A0A1W2PRP0 233 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 EIF2B2P49770 351 aaKnown RBP14.04□□□□□ -0.16
HDAC6-208ENST00000438518 INSL3P51460 131 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 PLP1P60201 277 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 NARS2Q96I59 477 aaKnown RBP14.04□□□□□ -0.16
HDAC6-208ENST00000438518 C20orf24Q9BUV8 137 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 MRPL27Q9P0M9 148 aaKnown RBP14.04□□□□□ -0.16
HDAC6-208ENST00000438518 RNF24Q9Y225 148 aa14.04□□□□□ -0.16
HDAC6-208ENST00000438518 BCL2L11O43521 198 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 LINC00869P0C866 280 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 CXCL2P19875 107 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 C4BPBP20851 252 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 EIF5AP63241 154 aaKnown RBP14.03□□□□□ -0.16
HDAC6-208ENST00000438518 PRR20EP86478 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 PRR20CP86479 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 PRR20DP86480 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 PRR20BP86481 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 PRR20AP86496 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 CD300CQ08708 224 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 Q6ZRG5 221 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 METTL26Q96S19 204 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 ARL6Q9H0F7 186 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 WFDC1Q9HC57 220 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 TIMM9Q9Y5J7 89 aa14.03□□□□□ -0.16
HDAC6-208ENST00000438518 A0A1W2PS18 150 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 TMEM213A2RRL7 107 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 C8orf88P0DMB2 117 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 NPPCP23582 126 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 TMEM231Q9H6L2 316 aa14.02□□□□□ -0.17
HDAC6-208ENST00000438518 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-208ENST00000438518 C2orf70A6NJV1 201 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 HNRNPCP07910 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC6-208ENST00000438518 CRYBB3P26998 211 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 B2MP61769 119 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 TMUB2Q71RG4 321 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 OR1L4Q8NGR5 311 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 GNPNAT1Q96EK6 184 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-208ENST00000438518 PFDN5Q99471 154 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 PSMG3Q9BT73 122 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-208ENST00000438518 PXMP4Q9Y6I8 212 aa14.01□□□□□ -0.17
HDAC6-208ENST00000438518 IGHV7-4-1A0A0J9YVY3 117 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 SEC14L6B5MCN3 397 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 CD5P06127 495 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 CSN3P07498 182 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 CBLN1P23435 193 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 LYZP61626 148 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 USF2Q15853 346 aaPredicted RBP14□□□□□ -0.17
HDAC6-208ENST00000438518 LGALSLQ3ZCW2 172 aaPredicted RBP14□□□□□ -0.17
HDAC6-208ENST00000438518 TMEM182Q6ZP80 229 aaPredicted RBP14□□□□□ -0.17
HDAC6-208ENST00000438518 PBDC1Q9BVG4 233 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 SLC39A9Q9NUM3 307 aa14□□□□□ -0.17
HDAC6-208ENST00000438518 HYPMO75409 117 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 FOLR2P14207 255 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 GATA2P23769 480 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-208ENST00000438518 TM4SF20Q53R12 229 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 MIC13Q5XKP0 118 aa13.99□□□□□ -0.17
HDAC6-208ENST00000438518 RPL7L1Q6DKI1 246 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms