RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TMEM200BQ69YZ2 307 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 Q6ZWC4 215 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 C8orf46Q8TAG6 207 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 MED13Q9UHV7 2174 aa5.46□□□□□ -1.54
CSDE1-205ENST00000438362 A0A1W2PS18 150 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 SNAI2O43623 268 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 FAM106CPP0CH98 169 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 FABP2P12104 132 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 GCSHP23434 173 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 UNQ5815/PRO19632Q6UWF5 114 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 FBXL7Q9UJT9 491 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 V9GYV3 84 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 PRR14LQ5THK1 2151 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 A1L4Q6 167 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 COL6A6A6NMZ7 2263 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 CFHR2P36980 270 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF134P52741 427 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 PRSS8Q16651 343 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF474Q6S9Z5 364 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-205ENST00000438362 SCGB1D4Q6XE38 83 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 ORMDL3Q8N138 153 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 LPAR2Q9HBW0 351 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 CREBBPQ92793 2442 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 LOC105371242A0A075B767 164 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 TCRAP04437 139 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 NPPCP23582 126 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 RAB9AP51151 201 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 RPL15P61313 204 aaKnown RBP5.45□□□□□ -1.54
CSDE1-205ENST00000438362 PRB3Q04118 309 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-205ENST00000438362 LHFPL4Q7Z7J7 247 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 C11orf53Q8IXP5 236 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 RNASE6Q93091 150 aaKnown RBP5.45□□□□□ -1.54
CSDE1-205ENST00000438362 TRGV9Q99603 122 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 NCOR1P1Q9H4R4 102 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 C21orf62Q9NYP8 219 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 PSG8Q9UQ74 426 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 MALRD1Q5VYJ5 2156 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 MUC21A0A0G2JKD1 596 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 MUC21A0A140T8X8 626 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 GGTLC3B5MD39 225 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 C10orf142B7Z368 130 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 MUC21Q5SSG8 566 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 PVRIGQ6DKI7 326 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 TNFRSF14Q92956 283 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 RNF125Q96EQ8 232 aa5.45□□□□□ -1.54
CSDE1-205ENST00000438362 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-205ENST00000438362 IGKV3-7A0A075B6H7 116 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 FBLL1A6NHQ2 334 aaKnown RBP5.44□□□□□ -1.54
CSDE1-205ENST00000438362 CGB1A6NKQ9 187 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PSG1P11464 419 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 TMPRSS3P57727 454 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 SRSF6Q13247 344 aaKnown RBP5.44□□□□□ -1.54
CSDE1-205ENST00000438362 C17orf58Q2M2W7 97 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 MED12LQ86YW9 2145 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ODF3L1Q8IXM7 274 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 LINC01560Q8TB33 94 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 METTL26Q96S19 204 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ZNRD1Q9P1U0 126 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 F11RQ9Y624 299 aaKnown RBP5.44□□□□□ -1.54
CSDE1-205ENST00000438362 TMEM178BH3BS89 294 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 IGLV1-44P01699 117 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 MGPP08493 103 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 SCGB1C2P0DMR2 95 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PDLIM4P50479 330 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR20EP86478 221 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR20CP86479 221 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR20DP86480 221 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR20BP86481 221 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR20AP86496 221 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 FBLN7Q53RD9 439 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PRR31Q5SQ13 230 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ERASQ7Z444 233 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 C18orf32Q8TCD1 76 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 PMS2P5A8MQ11 134 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 IGLV2-14P01704 120 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 IGHV1-8P0DP01 117 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 TSPOP30536 169 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 GPR183P32249 361 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 SRSF9Q13242 221 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF841Q6ZN19 808 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ZNF329Q86UD4 541 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 ABHD17AQ96GS6 310 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 C18orf15Q96N68 181 aa5.44□□□□□ -1.54
CSDE1-205ENST00000438362 NBR2O15453 112 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 GATA4P43694 442 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 LOXL3P58215 753 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 LYRM7Q5U5X0 104 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 EXOC3-AS1Q8N2X6 119 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 FER1L6-AS1Q8NA97 138 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 TRBV20OR9-2A0A075B6H5 130 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 C7orf71A4D174 169 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 PLP1P60201 277 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 HERVK_113P61574 105 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 POU2AF1Q16633 256 aa5.43□□□□□ -1.54
CSDE1-205ENST00000438362 SLC25A39Q9BZJ4 359 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-205ENST00000438362 NDUFA4L2Q9NRX3 87 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms