RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZNF329Q86UD4 541 aa14.15□□□□□ -0.14
HMGN1-206ENST00000431390 CCDC140Q96MF4 163 aa14.15□□□□□ -0.14
HMGN1-206ENST00000431390 ACTR3CQ9C0K3 210 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-206ENST00000431390 KLK15Q9H2R5 256 aa14.15□□□□□ -0.14
HMGN1-206ENST00000431390 CTXND1A0A1B0GTU2 59 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 TOMM40O96008 361 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 ELANEP08246 267 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 PLP1P60201 277 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 FOXE3Q13461 319 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 ZNF726P1Q15940 193 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 OR1L4Q8NGR5 311 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 MBD3L1Q8WWY6 194 aa14.14□□□□□ -0.15
HMGN1-206ENST00000431390 OR2T8A6NH00 312 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 NUPL2O15504 423 aaKnown RBP14.13□□□□□ -0.15
HMGN1-206ENST00000431390 CTSGP08311 255 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 RD3LP0DJH9 198 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 PSG1P11464 419 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 CDC34P49427 236 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-206ENST00000431390 FAM122CQ6P4D5 195 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 COMMD1Q8N668 190 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 GATAD1Q8WUU5 269 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 PFDN5Q99471 154 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 RNF2Q99496 336 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 HRH4Q9H3N8 390 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 C16orf95Q9H693 158 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 PFDN2Q9UHV9 154 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 A0A1W2PPV4 95 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 TEX46H3BTG2 121 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 HBE1P02100 147 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 GPR183P32249 361 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 RHOBP62745 196 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 FAM209BQ5JX69 171 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 RNF152Q8N8N0 203 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 SLC25A22Q9H936 323 aa14.13□□□□□ -0.15
HMGN1-206ENST00000431390 ELOA3CA0A087WX78 387 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-206ENST00000431390 NUDT19A8MXV4 375 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 CLEC3BP05452 202 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 OR51G1Q8NGK1 321 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 SFT2D1Q8WV19 159 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 RAB24Q969Q5 203 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 DNAJC4Q9NNZ3 241 aa14.12□□□□□ -0.15
HMGN1-206ENST00000431390 MAP1LC3B2A6NCE7 125 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 TGOLN2O43493 480 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 COX7A2P2O60397 106 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 OR2C1O95371 312 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 OR5G3P0C626 314 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 ADMP35318 185 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 ZNF343Q6P1L6 599 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 C10orf99Q6UWK7 81 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 IL34Q6ZMJ4 242 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 SSX7Q7RTT5 188 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 MYOZ3Q8TDC0 251 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 Q8WTZ3 238 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 TMEM37Q8WXS4 190 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 CHRDL1Q9BU40 450 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 MRPL32Q9BYC8 188 aaKnown RBP14.11□□□□□ -0.15
HMGN1-206ENST00000431390 MAP1LC3BQ9GZQ8 125 aa14.11□□□□□ -0.15
HMGN1-206ENST00000431390 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.1□□□□□ -0.15
HMGN1-206ENST00000431390 NDUFA7O95182 113 aa14.1□□□□□ -0.15
HMGN1-206ENST00000431390 KIAA0141Q14154 515 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-206ENST00000431390 C10orf113Q5VZT2 155 aa14.1□□□□□ -0.15
HMGN1-206ENST00000431390 SEPSECSQ9HD40 501 aaKnown RBP14.1□□□□□ -0.15
HMGN1-206ENST00000431390 FUT9Q9Y231 359 aa14.1□□□□□ -0.15
HMGN1-206ENST00000431390 WI2-2373I1.2A0A1W2PRP0 233 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 HYPMO75409 117 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 FAM78BQ5VT40 261 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 LCN15Q6UWW0 184 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 PATE2Q6UY27 113 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 ZNF600Q6ZNG1 722 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 LCNL1Q6ZST4 164 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 COMMD7Q86VX2 200 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 KLHDC1Q8N7A1 406 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 ZNF491Q8N8L2 437 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 TENM1Q9UKZ4 2725 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 ORM2P19652 201 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 LYZP61626 148 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 RELQ04864 619 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-206ENST00000431390 SLC7A5P1Q8MH63 180 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 OR4X2Q8NGF9 303 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 OR1B1Q8NGR6 318 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 MARC2Q969Z3 335 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 RNF125Q96EQ8 232 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 DOK5Q9P104 306 aa14.09□□□□□ -0.15
HMGN1-206ENST00000431390 IGHV3-11P01762 117 aa14.08□□□□□ -0.16
HMGN1-206ENST00000431390 IL4P05112 153 aa14.08□□□□□ -0.16
HMGN1-206ENST00000431390 RPLP1P05386 114 aaKnown RBP14.08□□□□□ -0.16
HMGN1-206ENST00000431390 STAG3L2P0CL84 134 aa14.08□□□□□ -0.16
HMGN1-206ENST00000431390 STAG3L3P0CL85 134 aa14.08□□□□□ -0.16
HMGN1-206ENST00000431390 UBE2E2Q96LR5 201 aa14.08□□□□□ -0.16
HMGN1-206ENST00000431390 RAB19A4D1S5 217 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 ARL3P36405 182 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 SPATA31B1PQ5VZV4 182 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 MIR17HGQ75NE6 70 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 LINC01006Q8NI28 216 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 WIPF2Q8TF74 440 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-206ENST00000431390 GNB4Q9HAV0 340 aa14.07□□□□□ -0.16
HMGN1-206ENST00000431390 MRPL27Q9P0M9 148 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms