RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
AC004540.1-202ENST00000430548 TMEM56-RWDD3S4R434 201 aa13.35□□□□□ -0.27
AC004540.1-202ENST00000430548 RYR1P21817 5038 aa13.35□□□□□ -0.27
AC004540.1-202ENST00000430548 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
AC004540.1-202ENST00000430548 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 TMEM268Q5VZI3 342 aa13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 SMIM4Q8WVI0 70 aa13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
AC004540.1-202ENST00000430548 CEBPZOSA8MTT3 80 aa13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 RTL8CO15255 209 aa13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 PSG1P11464 419 aa13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 NUP62P37198 522 aaPredicted RBP13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 IL22RA2Q969J5 263 aa13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 GPR132Q9UNW8 380 aa13.33□□□□□ -0.28
AC004540.1-202ENST00000430548 MUC4Q99102 2169 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 RD3LP0DJH9 198 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 GDF5OSQ5U4N7 250 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 OR8G2PQ6IF36 304 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 RNF125Q96EQ8 232 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 ACY3Q96HD9 319 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 CLUHP3Q96NS8 147 aa13.32□□□□□ -0.28
AC004540.1-202ENST00000430548 SMIM9A6NGZ8 99 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 SOCS3O14543 225 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 SMIM18P0DKX4 95 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 SULT1A3P0DMM9 295 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 SULT1A4P0DMN0 295 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 SAV1Q9H4B6 383 aaPredicted RBP13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 HSPB7Q9UBY9 170 aa13.31□□□□□ -0.28
AC004540.1-202ENST00000430548 TMEM189A5PLL7 270 aa13.3□□□□□ -0.28
AC004540.1-202ENST00000430548 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
AC004540.1-202ENST00000430548 MED14OSP0DP75 135 aa13.3□□□□□ -0.28
AC004540.1-202ENST00000430548 LGALS9BQ3B8N2 356 aa13.3□□□□□ -0.28
AC004540.1-202ENST00000430548 U3KQ87 197 aa13.3□□□□□ -0.28
AC004540.1-202ENST00000430548 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 CTDSPLO15194 276 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 SPART-AS1P0CW21 52 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 AKAIN1P0CW23 69 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 PSMB3P49720 205 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 FOXI2Q6ZQN5 318 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 FAM210BQ96KR6 192 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 PRRT1Q99946 306 aa13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
AC004540.1-202ENST00000430548 ABCA13Q86UQ4 5058 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 TEX48A0A1B0GUV7 120 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 DEFB1P60022 68 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 DTD1Q8TEA8 209 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 DKK2Q9UBU2 259 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
AC004540.1-202ENST00000430548 A0A0B4J2A0 478 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 IFNA10P01566 189 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 CCR6P51684 374 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 PAX9P55771 341 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 SUPT4H1P63272 117 aaKnown RBP13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 SMCO1Q147U7 214 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 ZNF79Q15937 498 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 C1orf194Q5T5A4 169 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 Q6ZR54 194 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 LGI3Q8N145 548 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 OR51S1Q8NGJ8 323 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 PRR13Q9NZ81 148 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 SHPKQ9UHJ6 478 aa13.27□□□□□ -0.29
AC004540.1-202ENST00000430548 CTDSP2O14595 271 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 RGS5O15539 181 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 ATP5IP56385 69 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 KLF9Q13886 244 aaPredicted RBP13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 OXA1LQ15070 435 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 SPATA31B1PQ5VZV4 182 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 PBDC1Q9BVG4 233 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 RBKSQ9H477 322 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
AC004540.1-202ENST00000430548 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 A8MTW9 85 aa13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 GPX4P36969 197 aaPredicted RBP13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 ZNF90Q03938 601 aa13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 GAMTQ14353 236 aa13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 RABL2AQ9UBK7 228 aaPredicted RBP13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 RABL2BQ9UNT1 228 aa13.25□□□□□ -0.29
AC004540.1-202ENST00000430548 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 M0R2N4 97 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 ISLRO14498 428 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 IGKV3-20P01619 116 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 ID1P41134 155 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 FXYD7P58549 80 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 FAM222AQ5U5X8 452 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 CLVS1Q8IUQ0 354 aaPredicted RBP13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 SLC35E1Q96K37 410 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 NIPSNAP3BQ9BS92 247 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
AC004540.1-202ENST00000430548 EMP1P54849 157 aa13.23□□□□□ -0.29
AC004540.1-202ENST00000430548 IL18Q14116 193 aa13.23□□□□□ -0.29
AC004540.1-202ENST00000430548 SPCS2Q15005 226 aa13.23□□□□□ -0.29
AC004540.1-202ENST00000430548 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms