RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 OR13C7P0DN81 318 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 HTR1DP28221 377 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 HOXD3P31249 432 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 GPX4P36969 197 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 RPL8P62917 257 aaKnown RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 ERHP84090 104 aaKnown RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 RAB31Q13636 194 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 VMA21Q3ZAQ7 101 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 SPINK9Q5DT21 86 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 FAM90A2PQ658T7 463 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM88Q6PEY1 159 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 TEPPQ6URK8 271 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 SSX7Q7RTT5 188 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM144Q7Z5S9 345 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 NDUFA11Q86Y39 141 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 OR2T6Q8NHC8 308 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 RAB24Q969Q5 203 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 ANAPC16Q96DE5 110 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 TVP23CQ96ET8 276 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 HARBI1Q96MB7 349 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 GGTLC1Q9BX51 225 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 COMMD5Q9GZQ3 224 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 ZNF702PQ9H963 129 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 RPS10P5Q9NQ39 176 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 AMMECR1Q9Y4X0 333 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 A0A1B0GV50 99 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 BUB1B-PAK6H3BSN5 160 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 YIF1AO95070 293 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 MT-ND4LP03901 98 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 CDC34P49427 236 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 ELLP55199 621 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 RPS16P62249 146 aaKnown RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 FLI1Q01543 452 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 Q8N2B8 174 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 CYB561D1Q8N8Q1 229 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 RNASEH2CQ8TDP1 164 aaKnown RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 DPF1Q92782 380 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 MGST2Q99735 147 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 NIPSNAP3BQ9BS92 247 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 NPFFR1Q9GZQ6 430 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 DPM3Q9P2X0 92 aa6.79□□□□□ -1.32
HDAC1-202ENST00000428704 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
HDAC1-202ENST00000428704 A0A1W2PPV4 95 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 ZFP92A6NM28 416 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 M0R036 132 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SNRNP70P08621 437 aaKnown RBP6.78□□□□□ -1.32
HDAC1-202ENST00000428704 STAG3L2P0CL84 134 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 STAG3L3P0CL85 134 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 CD28P10747 220 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 CD24P25063 80 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC1-202ENST00000428704 CD81P60033 236 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 MEF2BQ02080 365 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-202ENST00000428704 DIAPH2-AS1Q14236 149 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 TPTE2P1Q5T6R2 138 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 ZFAND6Q6FIF0 208 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 FAM122CQ6P4D5 195 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 ADAMTSL5Q6ZMM2 481 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 MMD2Q8IY49 270 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 WIPF2Q8TF74 440 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SLC35E1Q96K37 410 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 ASCL2Q99929 193 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SDF2L1Q9HCN8 221 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SERTAD4Q9NUC0 356 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 SLC45A2Q9UMX9 530 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 PRELID1Q9Y255 219 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 PUS1Q9Y606 427 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC1-202ENST00000428704 PXMP4Q9Y6I8 212 aa6.78□□□□□ -1.32
HDAC1-202ENST00000428704 CSMD3Q7Z407 3707 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 IGHV1-3A0A0C4DH29 117 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 A0A1W2PPI3 338 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 CXorf1O96002 111 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 LINC00869P0C866 280 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 PF4V1P10720 104 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 FGF8P55075 233 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-202ENST00000428704 BLCAPP62952 87 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 EGFEM1PQ0D2K5 195 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 HNF4GQ14541 408 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 TMEM95Q3KNT9 176 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 ZNF114Q8NC26 417 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-202ENST00000428704 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
HDAC1-202ENST00000428704 CTDSP1Q9GZU7 261 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 PITPNC1Q9UKF7 332 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 ARL2-SNX15V9GYD0 113 aa6.77□□□□□ -1.33
HDAC1-202ENST00000428704 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
HDAC1-202ENST00000428704 OOSP1A8MZH6 123 aa6.76□□□□□ -1.33
HDAC1-202ENST00000428704 PDE6DO43924 150 aa6.76□□□□□ -1.33
HDAC1-202ENST00000428704 CLN5O75503 358 aa6.76□□□□□ -1.33
HDAC1-202ENST00000428704 AMY1AP04745 511 aa6.76□□□□□ -1.33
HDAC1-202ENST00000428704 CRYGCP07315 174 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms