RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 SLC25A31Q9H0C2 315 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.64
SGCE-204ENST00000428696 SMPXQ9UHP9 88 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 H0YIZ8 118 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 MPC2O95563 127 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 TOMM40O96008 361 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 APOHP02749 345 aaPredicted RBP11.01□□□□□ -0.65
SGCE-204ENST00000428696 SULT1A1P50225 295 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 LYZP61626 148 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 HBG1P69891 147 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 HBG2P69892 147 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 NHLH2Q02577 135 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 PPP1R14BQ96C90 147 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 RNF126Q9BV68 326 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 MEGF8Q7Z7M0 2845 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 WIPF1O43516 503 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
SGCE-204ENST00000428696 BMI1P35226 326 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 P2RY1P47900 373 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 TFPI2P48307 235 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 LAMTOR1Q6IAA8 161 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 TRGV9Q99603 122 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 C11orf1Q9H5F2 150 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 MBD2Q9UBB5 411 aa11.01□□□□□ -0.65
SGCE-204ENST00000428696 IGKV1OR2-108A0A075B7D4 117 aa11□□□□□ -0.65
SGCE-204ENST00000428696 CHEK1O14757 476 aa11□□□□□ -0.65
SGCE-204ENST00000428696 C8orf88P0DMB2 117 aa11□□□□□ -0.65
SGCE-204ENST00000428696 ORM2P19652 201 aa11□□□□□ -0.65
SGCE-204ENST00000428696 S100A11P31949 105 aa11□□□□□ -0.65
SGCE-204ENST00000428696 TEPPQ6URK8 271 aa11□□□□□ -0.65
SGCE-204ENST00000428696 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
SGCE-204ENST00000428696 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
SGCE-204ENST00000428696 THAP8Q8NA92 274 aa11□□□□□ -0.65
SGCE-204ENST00000428696 ST8SIA2Q92186 375 aa11□□□□□ -0.65
SGCE-204ENST00000428696 RNF2Q99496 336 aa11□□□□□ -0.65
SGCE-204ENST00000428696 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
SGCE-204ENST00000428696 RABAC1Q9UI14 185 aa11□□□□□ -0.65
SGCE-204ENST00000428696 A0A1W2PS18 150 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 EWSR1Q01844 656 aaKnown RBP eCLIP10.99□□□□□ -0.65
SGCE-204ENST00000428696 RAB31Q13636 194 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 CLINT1Q14677 625 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 USF2Q15853 346 aaPredicted RBP10.99□□□□□ -0.65
SGCE-204ENST00000428696 CYP2G1PQ6ZSU1 146 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 WFDC3Q8IUB2 231 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 BPIFCQ8NFQ6 507 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 OR1B1Q8NGR6 318 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 RNF125Q96EQ8 232 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 GRAMD2BQ96HH9 432 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 DOK5Q9P104 306 aa10.99□□□□□ -0.65
SGCE-204ENST00000428696 UBE2L5PA0A1B0GUS4 154 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 K7EIL1 84 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 DFFBO76075 338 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
SGCE-204ENST00000428696 RPL12P30050 165 aaKnown RBP10.98□□□□□ -0.65
SGCE-204ENST00000428696 NUP62P37198 522 aaPredicted RBP10.98□□□□□ -0.65
SGCE-204ENST00000428696 BAXQ07812 192 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 TMEM182Q6ZP80 229 aaPredicted RBP10.98□□□□□ -0.65
SGCE-204ENST00000428696 TCF24Q7RTU0 167 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 OR5C1Q8NGR4 320 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 TMEM147Q9BVK8 224 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 SMIM3Q9BZL3 60 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 PFDN2Q9UHV9 154 aa10.98□□□□□ -0.65
SGCE-204ENST00000428696 ZNF785A8K8V0 405 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 DNASE2O00115 360 aaPredicted RBP10.97□□□□□ -0.65
SGCE-204ENST00000428696 GIPP09681 153 aaPredicted RBP10.97□□□□□ -0.65
SGCE-204ENST00000428696 OR5G3P0C626 314 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 CRYBB3P26998 211 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 RAP2BP61225 183 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 FGL1Q08830 312 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 ATP6V1FQ16864 119 aa10.97□□□□□ -0.65
SGCE-204ENST00000428696 hCG_2014768A0A024R1R8 64 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 FNDC10F2Z333 226 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 AGPAT2O15120 278 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 FGF7P21781 194 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 CD81P60033 236 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 PAFAH1B2P68402 229 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 Q5BKY6 102 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 OR2T35Q8NGX2 323 aa10.96□□□□□ -0.65
SGCE-204ENST00000428696 FXYD6-FXYD2A0A087WZ82 144 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 TRAV25A0A0B4J276 109 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 CFDP00746 253 aaPredicted RBP10.95□□□□□ -0.66
SGCE-204ENST00000428696 LINC00869P0C866 280 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 CAMLGP49069 296 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 EIF2B2P49770 351 aaKnown RBP10.95□□□□□ -0.66
SGCE-204ENST00000428696 SELENOTP62341 195 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 ARL6Q9H0F7 186 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 TUBA4BQ9H853 241 aa10.95□□□□□ -0.66
SGCE-204ENST00000428696 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms