RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CACFD1Q9UGQ2 172 aa8.75□□□□□ -1.01
TTC3-208ENST00000428693 TBC1D24Q9ULP9 559 aa8.75□□□□□ -1.01
TTC3-208ENST00000428693 U3KQ87 197 aa8.75□□□□□ -1.01
TTC3-208ENST00000428693 A0A0B4J2A0 478 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 TOMM40O96008 361 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 IGKV3-20P01619 116 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
TTC3-208ENST00000428693 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 PSG1P11464 419 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 MIFP14174 115 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 VAMP1P23763 118 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 TNFSF8P32971 234 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 FAUP35544 74 aaKnown RBP8.74□□□□□ -1.01
TTC3-208ENST00000428693 NUTF2P61970 127 aaKnown RBP8.74□□□□□ -1.01
TTC3-208ENST00000428693 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
TTC3-208ENST00000428693 NMSQ5H8A3 153 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 Q8NAQ8 132 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 RNF125Q96EQ8 232 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 SLC35E1Q96K37 410 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 LINC00052Q96N35 136 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 NRN1Q9NPD7 142 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 SHPKQ9UHJ6 478 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 PFDN2Q9UHV9 154 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 U3KQE9 123 aa8.74□□□□□ -1.01
TTC3-208ENST00000428693 C11orf94C9JXX5 98 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 GIG44P09565 113 aaPredicted RBP8.73□□□□□ -1.01
TTC3-208ENST00000428693 IAPPP10997 89 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 LYZP61626 148 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 SRPXP78539 464 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 OR2F1Q13607 317 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 ZNF767PQ75MW2 155 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 HSPB7Q9UBY9 170 aa8.73□□□□□ -1.01
TTC3-208ENST00000428693 FRAS1Q86XX4 4008 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 H3BMQ9 156 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 BUB3O43684 328 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 EMP1P54849 157 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 FXYD7P58549 80 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 AP3S2P59780 193 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 RAB11AP62491 216 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 SUPT4H1P63272 117 aaKnown RBP8.72□□□□□ -1.01
TTC3-208ENST00000428693 ZNF90Q03938 601 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 GSG1LQ6UXU4 331 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 Q6ZTC4 211 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 COQ8AQ8NI60 647 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 BCL7BQ9BQE9 202 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 C1QTNF4Q9BXJ3 329 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
TTC3-208ENST00000428693 X6R8D5 127 aa8.72□□□□□ -1.01
TTC3-208ENST00000428693 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
TTC3-208ENST00000428693 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 FABP1P07148 127 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 NUP62P37198 522 aaPredicted RBP8.71□□□□□ -1.02
TTC3-208ENST00000428693 DEFB1P60022 68 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 GAMTQ14353 236 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 OR4B1Q8NGF8 309 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 MAGT1Q9H0U3 335 aa8.71□□□□□ -1.02
TTC3-208ENST00000428693 ZNF705EA8MWA4 302 aaPredicted RBP8.7□□□□□ -1.02
TTC3-208ENST00000428693 SNRPGP15A8MWD9 76 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 H3BMM0 161 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 S100A5P33763 92 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
TTC3-208ENST00000428693 ID1P41134 155 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 TCTAP57738 103 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 PRR20EP86478 221 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 PRR20CP86479 221 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 PRR20DP86480 221 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 PRR20BP86481 221 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 PRR20AP86496 221 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 HRH4Q9H3N8 390 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
TTC3-208ENST00000428693 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 PIGBOS1A0A0B4J2F0 54 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 WRBO00258 174 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 MED6O75586 246 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 HOXB5P09067 269 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 INPP1P49441 399 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 RPP30P78346 268 aaKnown RBP8.69□□□□□ -1.02
TTC3-208ENST00000428693 TMEM128Q5BJH2 165 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
TTC3-208ENST00000428693 SLC25A22Q9H936 323 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
TTC3-208ENST00000428693 IGKV1D-37A0A075B6S9 117 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 DEFB131BA0A096LNP1 70 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 NKX2-1P43699 371 aaPredicted RBP8.68□□□□□ -1.02
TTC3-208ENST00000428693 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
TTC3-208ENST00000428693 GDF5OSQ5U4N7 250 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 OR8G2PQ6IF36 304 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 EBLN2Q6P2I7 272 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 SOSTQ9BQB4 213 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 C7orf50Q9BRJ6 194 aaKnown RBP8.68□□□□□ -1.02
TTC3-208ENST00000428693 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
TTC3-208ENST00000428693 DUXBA0A1W2PPF3 345 aa8.67□□□□□ -1.02
TTC3-208ENST00000428693 SMCO3A2RU48 225 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms