RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 H3BMM0 161 aa11.18□□□□□ -0.62
SEC13-210ENST00000428626 GDF5OSQ5U4N7 250 aa11.18□□□□□ -0.62
SEC13-210ENST00000428626 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
SEC13-210ENST00000428626 NRN1Q9NPD7 142 aa11.18□□□□□ -0.62
SEC13-210ENST00000428626 A0A0B4J2A0 478 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 IFNA10P01566 189 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 AKR1C4P17516 323 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 TNFSF8P32971 234 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 AP2S1P53680 142 aaPredicted RBP11.17□□□□□ -0.62
SEC13-210ENST00000428626 TCTAP57738 103 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 ZNF90Q03938 601 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 SMCO1Q147U7 214 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 ETFRF1Q6IPR1 90 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 SIGLEC15Q6ZMC9 328 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 WDR12Q9GZL7 423 aaKnown RBP11.17□□□□□ -0.62
SEC13-210ENST00000428626 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 SHPKQ9UHJ6 478 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 FAT2Q9NYQ8 4349 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
SEC13-210ENST00000428626 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 EIF2B2P49770 351 aaKnown RBP11.16□□□□□ -0.62
SEC13-210ENST00000428626 CCR6P51684 374 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 GAMTQ14353 236 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 LGI3Q8N145 548 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 RNF125Q96EQ8 232 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 MCUBQ9NWR8 336 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 KCNIP3Q9Y2W7 256 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 U3KQ87 197 aa11.16□□□□□ -0.62
SEC13-210ENST00000428626 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 PITX3O75364 302 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 TMBIM6P55061 237 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 KLF9Q13886 244 aaPredicted RBP11.15□□□□□ -0.62
SEC13-210ENST00000428626 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
SEC13-210ENST00000428626 SCP2D1Q9UJQ7 156 aa11.15□□□□□ -0.62
SEC13-210ENST00000428626 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 H3BMQ9 156 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 SOCS3O14543 225 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
SEC13-210ENST00000428626 NOXA1Q86UR1 476 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 RABL2AQ9UBK7 228 aaPredicted RBP11.14□□□□□ -0.63
SEC13-210ENST00000428626 RSL24D1Q9UHA3 163 aaKnown RBP11.14□□□□□ -0.63
SEC13-210ENST00000428626 RABL2BQ9UNT1 228 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
SEC13-210ENST00000428626 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
SEC13-210ENST00000428626 FXYD7P58549 80 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
SEC13-210ENST00000428626 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 C17orf77Q96MU5 243 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 BCL7BQ9BQE9 202 aa11.13□□□□□ -0.63
SEC13-210ENST00000428626 ZFP92A6NM28 416 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 IAPPP10997 89 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
SEC13-210ENST00000428626 OR2F1Q13607 317 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 OR8G2PQ6IF36 304 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 ZNF709Q8N972 641 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 CACFD1Q9UGQ2 172 aa11.12□□□□□ -0.63
SEC13-210ENST00000428626 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
SEC13-210ENST00000428626 F6UB75 175 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
SEC13-210ENST00000428626 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
SEC13-210ENST00000428626 LYZP61626 148 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 TMED4Q7Z7H5 227 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 MCFD2Q8NI22 146 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 SLC35E1Q96K37 410 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 LINC00052Q96N35 136 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 C1QTNF4Q9BXJ3 329 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
SEC13-210ENST00000428626 V9GYH0 126 aa11.11□□□□□ -0.63
SEC13-210ENST00000428626 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 AMBPP02760 352 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 NUTF2P61970 127 aaKnown RBP11.1□□□□□ -0.63
SEC13-210ENST00000428626 SRPXP78539 464 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 ZNF79Q15937 498 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 C20orf173Q96LM9 149 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 TRGV9Q99603 122 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 SLC35B3Q9H1N7 401 aa11.1□□□□□ -0.63
SEC13-210ENST00000428626 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 ANXA3P12429 323 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
SEC13-210ENST00000428626 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 TMEM182Q6ZP80 229 aaPredicted RBP11.09□□□□□ -0.63
SEC13-210ENST00000428626 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 NEU1Q99519 415 aa11.09□□□□□ -0.63
SEC13-210ENST00000428626 MAGT1Q9H0U3 335 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms