RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 KIR2DL5AQ8N109 375 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 STXBP6Q8NFX7 210 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 KIR2DL5BQ8NHK3 375 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 RNF183Q96D59 192 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 NARS2Q96I59 477 aaKnown RBP6.98□□□□□ -1.29
TRIM39-208ENST00000428555 MAGT1Q9H0U3 335 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 CSTL1Q9H114 145 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 NDUFA13Q9P0J0 144 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 PAIP2BQ9ULR5 123 aaKnown RBP6.98□□□□□ -1.29
TRIM39-208ENST00000428555 TMED3Q9Y3Q3 217 aa6.98□□□□□ -1.29
TRIM39-208ENST00000428555 MPTX1A8MV57 137 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 K7EQG2 157 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 WRBO00258 174 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 ADAP1O75689 374 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 NDUFB6O95139 128 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 IL4P05112 153 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 ZNF90Q03938 601 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 USF2Q15853 346 aaPredicted RBP6.97□□□□□ -1.29
TRIM39-208ENST00000428555 OR51G1Q8NGK1 321 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 GRAMD2BQ96HH9 432 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
TRIM39-208ENST00000428555 IGKV1D-37A0A075B6S9 117 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 TRAV2A0A0B4J234 112 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 A0A0J9YWU9 116 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 ZFP92A6NM28 416 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 CENPXA8MT69 81 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 FAM90A26D6RGX4 464 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 PLA2G10O15496 165 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 SYNGR2O43760 224 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 MED6O75586 246 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 TOMM40O96008 361 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 OR4E1P0C645 316 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 IL7P13232 177 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 ANXA7P20073 488 aaKnown RBP6.96□□□□□ -1.3
TRIM39-208ENST00000428555 BTCP35070 178 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 UBE2MP61081 183 aaKnown RBP6.96□□□□□ -1.3
TRIM39-208ENST00000428555 RAB11AP62491 216 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 EWSR1Q01844 656 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM39-208ENST00000428555 LYG2Q86SG7 212 aa6.96□□□□□ -1.3
TRIM39-208ENST00000428555 LCE6AA0A183 80 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 HELTA6NFD8 242 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 KNCNA6PVL3 124 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 BUB3O43684 328 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 AP2S1P53680 142 aaPredicted RBP6.95□□□□□ -1.3
TRIM39-208ENST00000428555 ID3Q02535 119 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 DHRS2Q13268 280 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 OR2F1Q13607 317 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 SPANXN5Q5MJ07 72 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 DCANP1Q8TF63 244 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 SLC35E1Q96K37 410 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 CIB3Q96Q77 187 aaPredicted RBP6.95□□□□□ -1.3
TRIM39-208ENST00000428555 PBDC1Q9BVG4 233 aa6.95□□□□□ -1.3
TRIM39-208ENST00000428555 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 SNRPGP15A8MWD9 76 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 IFNA21P01568 189 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 EIF2B2P49770 351 aaKnown RBP6.94□□□□□ -1.3
TRIM39-208ENST00000428555 POLR2GP62487 172 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM39-208ENST00000428555 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
TRIM39-208ENST00000428555 STHQ8IWL8 128 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 COQ8AQ8NI60 647 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 RNF125Q96EQ8 232 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 RAB40CQ96S21 281 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 RARRES2Q99969 163 aa6.94□□□□□ -1.3
TRIM39-208ENST00000428555 C7orf50Q9BRJ6 194 aaKnown RBP6.94□□□□□ -1.3
TRIM39-208ENST00000428555 PGPEP1LA6NFU8 196 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 PRSS46E5RG02 174 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 H3BP45 60 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
TRIM39-208ENST00000428555 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
TRIM39-208ENST00000428555 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
TRIM39-208ENST00000428555 LYZP61626 148 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 PMS2P11Q13670 270 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 PSMG4Q5JS54 123 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 ACTL10Q5JWF8 245 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 GSG1LQ6UXU4 331 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 SIGLEC15Q6ZMC9 328 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 THAP8Q8NA92 274 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 OR11H2Q8NH07 326 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 GATAD1Q8WUU5 269 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 TRGV9Q99603 122 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 GSKIPQ9P0R6 139 aa6.93□□□□□ -1.3
TRIM39-208ENST00000428555 STRAPQ9Y3F4 350 aaKnown RBP6.93□□□□□ -1.3
TRIM39-208ENST00000428555 LYSTQ99698 3801 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 CXorf65A6NEN9 183 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 LYRM1O43325 122 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 FABP1P07148 127 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 GATA2P23769 480 aaPredicted RBP6.92□□□□□ -1.3
TRIM39-208ENST00000428555 PAX9P55771 341 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 CNPY1Q3B7I2 92 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 OR8G2PQ6IF36 304 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 TMEM182Q6ZP80 229 aaPredicted RBP6.92□□□□□ -1.3
TRIM39-208ENST00000428555 TRPT1Q86TN4 253 aaKnown RBP6.92□□□□□ -1.3
TRIM39-208ENST00000428555 LINC00469Q8N7U9 141 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 MITD1Q8WV92 249 aa6.92□□□□□ -1.3
TRIM39-208ENST00000428555 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms