RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
VARS2-203ENST00000428017 SMLR1H3BR10 107 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 NPPCP23582 126 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 LYZP61626 148 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 SELENOTP62341 195 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 IL34Q6ZMJ4 242 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 CYP2G1PQ6ZSU1 146 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 AKAP14Q86UN6 197 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 RNF125Q96EQ8 232 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 ATP5SQ99766 215 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 SMIM3Q9BZL3 60 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 ANK2Q01484 3957 aa11.52□□□□□ -0.57
VARS2-203ENST00000428017 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 A0A1W2PS18 150 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 G3V4G9 280 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 IFNA5P01569 189 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 FGF7P21781 194 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 S100A7P31151 101 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 CAMLGP49069 296 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 SAMD5Q5TGI4 173 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 TMEM231Q9H6L2 316 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
VARS2-203ENST00000428017 RABAC1Q9UI14 185 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 WDR83OSQ9Y284 106 aa11.51□□□□□ -0.57
VARS2-203ENST00000428017 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
VARS2-203ENST00000428017 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 AGPAT2O15120 278 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 ARPC5O15511 151 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 MPDU1O75352 247 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 C8orf88P0DMB2 117 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
VARS2-203ENST00000428017 ZNF709Q8N972 641 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 PPP1R14BQ96C90 147 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 ZNF414Q96IQ9 312 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 SMPXQ9UHP9 88 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 TNFSF18Q9UNG2 199 aa11.5□□□□□ -0.57
VARS2-203ENST00000428017 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 WI2-2373I1.2A0A1W2PRP0 233 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 G3V3Q6 166 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 IGLV1-51P01701 117 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 HNRNPCP07910 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
VARS2-203ENST00000428017 LINC00869P0C866 280 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 ORM2P19652 201 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 EDN2P20800 178 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 GATA2P23769 480 aaPredicted RBP11.49□□□□□ -0.57
VARS2-203ENST00000428017 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
VARS2-203ENST00000428017 LAMTOR1Q6IAA8 161 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 LCN12Q6JVE5 192 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 MGST2Q99735 147 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 FBXL17Q9UF56 701 aa11.49□□□□□ -0.57
VARS2-203ENST00000428017 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 WIPF1O43516 503 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 CRYBB3P26998 211 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
VARS2-203ENST00000428017 ZNF266Q14584 549 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 DEFB114Q30KQ6 69 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 Q6ZRG5 221 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
VARS2-203ENST00000428017 TCTE3Q8IZS6 198 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 OR1B1Q8NGR6 318 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 OR2K2Q8NGT1 345 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 ST6GAL2Q96JF0 529 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
VARS2-203ENST00000428017 MFFQ9GZY8 342 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
VARS2-203ENST00000428017 DNHD1Q96M86 4753 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 IGHV3-66A0A0C4DH42 116 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 RNF222A6NCQ9 220 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 C17orf112F2Z3M2 114 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 CHEK1O14757 476 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 HYPMO75409 117 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 CD5P06127 495 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 OR5G3P0C626 314 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
VARS2-203ENST00000428017 PXDC1Q5TGL8 231 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 TMEM182Q6ZP80 229 aaPredicted RBP11.47□□□□□ -0.57
VARS2-203ENST00000428017 ST8SIA2Q92186 375 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 NPCDR1Q9BY65 106 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 DOK5Q9P104 306 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 MLXQ9UH92 298 aa11.47□□□□□ -0.57
VARS2-203ENST00000428017 HMSDA8MTL9 139 aa11.46□□□□□ -0.57
VARS2-203ENST00000428017 COX7A2P2O60397 106 aa11.46□□□□□ -0.57
VARS2-203ENST00000428017 RPL29P47914 159 aaKnown RBP11.46□□□□□ -0.57
VARS2-203ENST00000428017 RPL11P62913 178 aaKnown RBP11.46□□□□□ -0.57
VARS2-203ENST00000428017 OPCMLQ14982 345 aa11.46□□□□□ -0.57
VARS2-203ENST00000428017 GUCA2BQ16661 112 aa11.46□□□□□ -0.57
VARS2-203ENST00000428017 MIC13Q5XKP0 118 aa11.46□□□□□ -0.57
VARS2-203ENST00000428017 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 464.5 ms