RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 GLMPQ8WWB7 406 aa13.54□□□□□ -0.24
GPC1-205ENST00000427506 RARRES2Q99969 163 aa13.54□□□□□ -0.24
GPC1-205ENST00000427506 MAGT1Q9H0U3 335 aa13.54□□□□□ -0.24
GPC1-205ENST00000427506 WRBO00258 174 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 SYNGR2O43760 224 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 NDUFB6O95139 128 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 FABP1P07148 127 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
GPC1-205ENST00000427506 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 RNF125Q96EQ8 232 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 CIB3Q96Q77 187 aaPredicted RBP13.53□□□□□ -0.24
GPC1-205ENST00000427506 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 CSMD3Q7Z407 3707 aa13.53□□□□□ -0.24
GPC1-205ENST00000427506 C9orf170A2RU37 121 aa13.52□□□□□ -0.25
GPC1-205ENST00000427506 SIGLEC15Q6ZMC9 328 aa13.52□□□□□ -0.25
GPC1-205ENST00000427506 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.25
GPC1-205ENST00000427506 KNCNA6PVL3 124 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 BUB3O43684 328 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 ADAP1O75689 374 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
GPC1-205ENST00000427506 ZNF90Q03938 601 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 PSMG4Q5JS54 123 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 OR11H2Q8NH07 326 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
GPC1-205ENST00000427506 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 IFNA21P01568 189 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 LYZP61626 148 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 ACTL10Q5JWF8 245 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 SPANXN5Q5MJ07 72 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 SDHCQ99643 169 aaPredicted RBP13.5□□□□□ -0.25
GPC1-205ENST00000427506 C7orf50Q9BRJ6 194 aaKnown RBP13.5□□□□□ -0.25
GPC1-205ENST00000427506 NRN1Q9NPD7 142 aa13.5□□□□□ -0.25
GPC1-205ENST00000427506 NUPR2A6NF83 97 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 SNRPGP15A8MWD9 76 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 OR4E1P0C645 316 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 IL7P13232 177 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 ATF4P18848 351 aaPredicted RBP13.49□□□□□ -0.25
GPC1-205ENST00000427506 SNRPD3P62318 126 aaKnown RBP13.49□□□□□ -0.25
GPC1-205ENST00000427506 OR2F1Q13607 317 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 C4orf46Q504U0 113 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
GPC1-205ENST00000427506 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 STARD9Q9P2P6 4700 aa13.49□□□□□ -0.25
GPC1-205ENST00000427506 H3BP45 60 aa13.48□□□□□ -0.25
GPC1-205ENST00000427506 SPP1P10451 314 aa13.48□□□□□ -0.25
GPC1-205ENST00000427506 ANXA7P20073 488 aaKnown RBP13.48□□□□□ -0.25
GPC1-205ENST00000427506 MORN3Q6PF18 240 aaPredicted RBP13.48□□□□□ -0.25
GPC1-205ENST00000427506 RAB40CQ96S21 281 aa13.48□□□□□ -0.25
GPC1-205ENST00000427506 TRGV9Q99603 122 aa13.48□□□□□ -0.25
GPC1-205ENST00000427506 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
GPC1-205ENST00000427506 TMEM41BQ5BJD5 291 aa13.47□□□□□ -0.25
GPC1-205ENST00000427506 CEMP1Q6PRD7 247 aaPredicted RBP13.47□□□□□ -0.25
GPC1-205ENST00000427506 DYNC2H1Q8NCM8 4307 aaKnown RBP13.46□□□□□ -0.25
GPC1-205ENST00000427506 BTCP35070 178 aa13.46□□□□□ -0.25
GPC1-205ENST00000427506 NKX2-1P43699 371 aaPredicted RBP13.46□□□□□ -0.25
GPC1-205ENST00000427506 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
GPC1-205ENST00000427506 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
GPC1-205ENST00000427506 FBXL17Q9UF56 701 aa13.46□□□□□ -0.25
GPC1-205ENST00000427506 KLK5Q9Y337 293 aaPredicted RBP13.46□□□□□ -0.25
GPC1-205ENST00000427506 DEFB4AO15263 64 aa13.45□□□□□ -0.26
GPC1-205ENST00000427506 ID3Q02535 119 aa13.45□□□□□ -0.26
GPC1-205ENST00000427506 AKR1C1Q04828 323 aa13.45□□□□□ -0.26
GPC1-205ENST00000427506 CNPY1Q3B7I2 92 aa13.45□□□□□ -0.26
GPC1-205ENST00000427506 C11orf68Q9H3H3 251 aaKnown RBP13.45□□□□□ -0.26
GPC1-205ENST00000427506 SEPSECSQ9HD40 501 aaKnown RBP13.45□□□□□ -0.26
GPC1-205ENST00000427506 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
GPC1-205ENST00000427506 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 SSSCA1O60232 199 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
GPC1-205ENST00000427506 C4BPBP20851 252 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 OR8I2Q8N0Y5 310 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 OR4D5Q8NGN0 318 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 C11orf45Q8TAV5 145 aa13.44□□□□□ -0.26
GPC1-205ENST00000427506 PHLDA1Q8WV24 401 aaPredicted RBP13.44□□□□□ -0.26
GPC1-205ENST00000427506 SMCO3A2RU48 225 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 GIG44P09565 113 aaPredicted RBP13.43□□□□□ -0.26
GPC1-205ENST00000427506 ID1P41134 155 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
GPC1-205ENST00000427506 NUTF2P61970 127 aaKnown RBP13.43□□□□□ -0.26
GPC1-205ENST00000427506 IAH1Q2TAA2 248 aaPredicted RBP13.43□□□□□ -0.26
GPC1-205ENST00000427506 ACOT7LQ6ZUV0 252 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 BPIFCQ8NFQ6 507 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 LINC00052Q96N35 136 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 C20orf85Q9H1P6 137 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
GPC1-205ENST00000427506 PLA2G10O15496 165 aa13.42□□□□□ -0.26
GPC1-205ENST00000427506 LYRM1O43325 122 aa13.42□□□□□ -0.26
GPC1-205ENST00000427506 LYSTQ99698 3801 aa13.42□□□□□ -0.26
GPC1-205ENST00000427506 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
GPC1-205ENST00000427506 LY6G6CO95867 125 aa13.41□□□□□ -0.26
GPC1-205ENST00000427506 ORM2P19652 201 aa13.41□□□□□ -0.26
GPC1-205ENST00000427506 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
GPC1-205ENST00000427506 MITD1Q8WV92 249 aa13.41□□□□□ -0.26
GPC1-205ENST00000427506 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms