RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 HIST1H1BP16401 226 aaKnown RBP20.88■□□□□ 0.93
SH3GL3-202ENST00000427482 S4R3C0 116 aa20.88■□□□□ 0.93
SH3GL3-202ENST00000427482 ABCA12Q86UK0 2595 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 A6NDX4 124 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 LINC01548A6NM66 108 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 OR2J3O76001 311 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 PRSS57Q6UWY2 283 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 KRTAP1-3Q8IUG1 177 aa20.87■□□□□ 0.93
SH3GL3-202ENST00000427482 MAP1AP78559 2803 aaPredicted RBP20.86■□□□□ 0.93
SH3GL3-202ENST00000427482 TRAV30A0A087WSZ9 112 aa20.86■□□□□ 0.93
SH3GL3-202ENST00000427482 UBE2L3P68036 154 aaKnown RBP20.86■□□□□ 0.93
SH3GL3-202ENST00000427482 PAXXQ9BUH6 204 aa20.86■□□□□ 0.93
SH3GL3-202ENST00000427482 C21orf62Q9NYP8 219 aa20.86■□□□□ 0.93
SH3GL3-202ENST00000427482 SCO2A0A1W2PP80 73 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 F8W735 103 aaPredicted RBP20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 NDUFB4O95168 129 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 RD3LP0DJH9 198 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 C15orf54Q8N8G6 183 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 GNG7O60262 68 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 TOMM40O96008 361 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 LYZP61626 148 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 LY6EQ16553 131 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 HIST2H2BCQ6DN03 193 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 Q96MF0 132 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 OR51M1Q9H341 326 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 FBXL7Q9UJT9 491 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 HIGD1AQ9Y241 93 aa20.85■□□□□ 0.93
SH3GL3-202ENST00000427482 A0A1W2PRE2 83 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 COLCA2A8K830 154 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 PYYP10082 97 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 C16orf82Q7Z2V1 217 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 C11orf52Q96A22 123 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 CELSR1Q9NYQ6 3014 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 NAV2Q8IVL1 2488 aa20.84■□□□□ 0.93
SH3GL3-202ENST00000427482 G3V318 75 aa20.83■□□□□ 0.93
SH3GL3-202ENST00000427482 RPL23P62829 140 aaKnown RBP20.83■□□□□ 0.93
SH3GL3-202ENST00000427482 STXBP6Q8NFX7 210 aa20.83■□□□□ 0.93
SH3GL3-202ENST00000427482 ISOC2Q96AB3 205 aa20.83■□□□□ 0.93
SH3GL3-202ENST00000427482 DERL1Q9BUN8 251 aa20.83■□□□□ 0.93
SH3GL3-202ENST00000427482 CRIP2P52943 208 aaPredicted RBP20.83■□□□□ 0.92
SH3GL3-202ENST00000427482 YPEL3P61236 119 aaPredicted RBP20.83■□□□□ 0.92
SH3GL3-202ENST00000427482 Q56UQ5 140 aa20.83■□□□□ 0.92
SH3GL3-202ENST00000427482 FXYD5Q96DB9 178 aa20.83■□□□□ 0.92
SH3GL3-202ENST00000427482 APCP25054 2843 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 PRRC2AP48634 2157 aaKnown RBP20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 OR2C1O95371 312 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 ADIRFQ15847 76 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 VN1R17PQ8TDU5 208 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 PITPNC1Q9UKF7 332 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 CSMD1Q96PZ7 3565 aa20.82■□□□□ 0.92
SH3GL3-202ENST00000427482 TRBV9A0A0B4J1U6 114 aa20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 GGTLC3B5MD39 225 aa20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 FCGR2BP31994 310 aaPredicted RBP20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 C19orf54Q5BKX5 351 aa20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 MRPL27Q9P0M9 148 aaKnown RBP20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 TXN2Q99757 166 aa20.81■□□□□ 0.92
SH3GL3-202ENST00000427482 MDFIC2A0A1B0GVS7 189 aa20.8■□□□□ 0.92
SH3GL3-202ENST00000427482 M0QZK8 103 aa20.8■□□□□ 0.92
SH3GL3-202ENST00000427482 ZNF491Q8N8L2 437 aa20.8■□□□□ 0.92
SH3GL3-202ENST00000427482 FSHBP01225 129 aa20.79■□□□□ 0.92
SH3GL3-202ENST00000427482 IGHV3-23P01764 117 aa20.79■□□□□ 0.92
SH3GL3-202ENST00000427482 RHOGP84095 191 aa20.79■□□□□ 0.92
SH3GL3-202ENST00000427482 SLC25A39Q9BZJ4 359 aaPredicted RBP20.79■□□□□ 0.92
SH3GL3-202ENST00000427482 TRAV41A0A0B4J266 112 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 WI2-2373I1.2A0A1W2PRP0 233 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 GP9P14770 177 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 BCL6BQ8N143 479 aaPredicted RBP20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 HIST1H2BAQ96A08 127 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 RNF125Q96EQ8 232 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 YPEL4Q96NS1 127 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 CXorf65A6NEN9 183 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 ATF4P18848 351 aaPredicted RBP20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 DEFB112Q30KQ8 113 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 C15orf32Q32M92 178 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 RNF212Q495C1 297 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 C9orf152Q5JTZ5 239 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 TMEM242Q9NWH2 141 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 CSPG4Q6UVK1 2322 aa20.78■□□□□ 0.92
SH3GL3-202ENST00000427482 SCGB2A1O75556 95 aa20.77■□□□□ 0.92
SH3GL3-202ENST00000427482 IL4P05112 153 aa20.77■□□□□ 0.92
SH3GL3-202ENST00000427482 SUMO1P63165 101 aaKnown RBP20.77■□□□□ 0.92
SH3GL3-202ENST00000427482 ZNF502Q8TBZ5 544 aa20.77■□□□□ 0.92
SH3GL3-202ENST00000427482 OR2T8A6NH00 312 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 IGHG2P01859 326 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 LEMD1Q68G75 181 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 ZNF343Q6P1L6 599 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 FAM24BQ8N5W8 94 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 NECAP1Q8NC96 275 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 Q8WTZ3 238 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 CTDSP1Q9GZU7 261 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 PRELID1Q9Y255 219 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 TRBV20OR9-2A0A075B6H5 130 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 MT-ND4LP03901 98 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 IGF1P05019 195 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 LINC01551Q86U37 167 aa20.76■□□□□ 0.91
SH3GL3-202ENST00000427482 H3BRN7 92 aa20.75■□□□□ 0.91
SH3GL3-202ENST00000427482 CTSGP08311 255 aa20.75■□□□□ 0.91
SH3GL3-202ENST00000427482 CRYBB3P26998 211 aa20.75■□□□□ 0.91
SH3GL3-202ENST00000427482 SHANK2-AS3Q9BTD1 123 aa20.75■□□□□ 0.91
SH3GL3-202ENST00000427482 ELOVL1Q9BW60 279 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms