RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TAS2R30P59541 319 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 SPCS3P61009 180 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 BLCAPP62952 87 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 PRCDQ00LT1 54 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 WT1-ASQ06250 92 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 MMDQ15546 238 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 IAH1Q2TAA2 248 aaPredicted RBP4.17□□□□□ -1.74
C9orf3-205ENST00000427193 VMA21Q3ZAQ7 101 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 C10orf55Q5SWW7 151 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 KPRPQ5T749 579 aaPredicted RBP4.17□□□□□ -1.74
C9orf3-205ENST00000427193 H2BFWTQ7Z2G1 175 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 MMD2Q8IY49 270 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 STPG2Q8N412 459 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 SPIN2AQ99865 258 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 SPIN2BQ9BPZ2 258 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 HSPB9Q9BQS6 159 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 RANBP3Q9H6Z4 567 aaPredicted RBP4.17□□□□□ -1.74
C9orf3-205ENST00000427193 RANGRFQ9HD47 186 aaPredicted RBP4.17□□□□□ -1.74
C9orf3-205ENST00000427193 METTL1Q9UBP6 276 aaKnown RBP4.17□□□□□ -1.74
C9orf3-205ENST00000427193 PITPNC1Q9UKF7 332 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 NSG2Q9Y328 171 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 MOB4Q9Y3A3 225 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 LYSTQ99698 3801 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 DNAH9Q9NYC9 4486 aa4.17□□□□□ -1.74
C9orf3-205ENST00000427193 RNF222A6NCQ9 220 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 HMSDA8MTL9 139 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 UBE2CO00762 179 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 SYNGR2O43760 224 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 GPR137BO60478 399 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 CA2P00918 260 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 CTRB1P17538 263 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 MDKP21741 143 aaPredicted RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 PSMB6P28072 239 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 NKX2-1P43699 371 aaPredicted RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 AKR1C2P52895 323 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 MFAP2P55001 183 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 ATP5IP56385 69 aaPredicted RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 ERVK-16P61578 105 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 AKIRIN2Q53H80 203 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 CTRB2Q6GPI1 263 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 THOC7Q6I9Y2 204 aaKnown RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 LAMTOR1Q6IAA8 161 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 PRSS54Q6PEW0 395 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 TMEM14EPQ6UXP3 125 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 SSX9Q7RTT3 188 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 HSD17B13Q7Z5P4 300 aaPredicted RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 TTC9CQ8N5M4 171 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 OR1S1Q8NH92 325 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 OR2T6Q8NHC8 308 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 MYOZ3Q8TDC0 251 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 SRSF12Q8WXF0 261 aaKnown RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 SMIM8Q96KF7 97 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 C16orf95Q9H693 158 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 ZNF702PQ9H963 129 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 RPS10P5Q9NQ39 176 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 FKBP11Q9NYL4 201 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 WSB1Q9Y6I7 421 aa4.16□□□□□ -1.74
C9orf3-205ENST00000427193 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
C9orf3-205ENST00000427193 TRBV9A0A0B4J1U6 114 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 C13orf42A0A1B0GVH6 325 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 SOX15O60248 233 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 CCNKO75909 580 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 NDUFA7O95182 113 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 C1QBP02746 253 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 RNASE2P10153 161 aaKnown RBP4.15□□□□□ -1.75
C9orf3-205ENST00000427193 AREGP15514 252 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 POLR2GP62487 172 aaKnown RBP eCLIP4.15□□□□□ -1.75
C9orf3-205ENST00000427193 KIAA0141Q14154 515 aaPredicted RBP4.15□□□□□ -1.75
C9orf3-205ENST00000427193 LY6EQ16553 131 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 AKAP14Q86UN6 197 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 UXS1Q8NBZ7 420 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR10W1Q8NGF6 305 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR1L8Q8NGR8 309 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR2T35Q8NGX2 323 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 PPP1R14BQ96C90 147 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF414Q96IQ9 312 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 AQP10Q96PS8 301 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR4C12Q96R67 309 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 RAB40CQ96S21 281 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 ATP6V0BQ99437 205 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 P2RX4Q99571 388 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 RBKSQ9H477 322 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 LYRM2Q9NU23 88 aaPredicted RBP4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR5AC2Q9NZP5 309 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 TNFSF18Q9UNG2 199 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 OR51B2Q9Y5P1 312 aa4.15□□□□□ -1.75
C9orf3-205ENST00000427193 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 IGLV11-55A0A075B6I3 123 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 C5orf51A6NDU8 294 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 MSGN1A6NI15 193 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 NCBP2LA6PVI3 153 aaKnown RBP4.14□□□□□ -1.75
C9orf3-205ENST00000427193 E5RGE8 158 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 ATP6V0E1O15342 81 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 SNAPC5O75971 98 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 IGHG4P01861 327 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 PRB2P02812 416 aaPredicted RBP4.14□□□□□ -1.75
C9orf3-205ENST00000427193 FCGR2BP31994 310 aaPredicted RBP4.14□□□□□ -1.75
C9orf3-205ENST00000427193 RPL27AP46776 148 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms