RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ISOC2Q96AB3 205 aa20.8■□□□□ 0.92
LDB1-202ENST00000425280 SCO2A0A1W2PP80 73 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 H3BUX3 64 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 MFAP4P55083 255 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 ZNF48Q96MX3 618 aaPredicted RBP20.79■□□□□ 0.92
LDB1-202ENST00000425280 RD3LP0DJH9 198 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 IGHV4-31P0DP07 118 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 PYYP10082 97 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 UBE2L3P68036 154 aaKnown RBP20.79■□□□□ 0.92
LDB1-202ENST00000425280 MBD6Q96DN6 1003 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 PAXXQ9BUH6 204 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 DERL1Q9BUN8 251 aa20.79■□□□□ 0.92
LDB1-202ENST00000425280 CR1P17927 2039 aa20.78■□□□□ 0.92
LDB1-202ENST00000425280 F8W735 103 aaPredicted RBP20.78■□□□□ 0.92
LDB1-202ENST00000425280 LYZP61626 148 aa20.78■□□□□ 0.92
LDB1-202ENST00000425280 LY6EQ16553 131 aa20.78■□□□□ 0.92
LDB1-202ENST00000425280 C15orf54Q8N8G6 183 aa20.78■□□□□ 0.92
LDB1-202ENST00000425280 A6NDX4 124 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 FABP1P07148 127 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 KLK9Q2XQG4 91 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 OR51M1Q9H341 326 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 C21orf62Q9NYP8 219 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 FBXL7Q9UJT9 491 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 KLK9Q9UKQ9 250 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 NAV2Q8IVL1 2488 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 G3V318 75 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 GNG7O60262 68 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 HIST1H1BP16401 226 aaKnown RBP20.77■□□□□ 0.92
LDB1-202ENST00000425280 RPL23P62829 140 aaKnown RBP20.77■□□□□ 0.92
LDB1-202ENST00000425280 ADIRFQ15847 76 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 C16orf82Q7Z2V1 217 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 KRTAP1-3Q8IUG1 177 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 TMEM68Q96MH6 324 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 HIGD1AQ9Y241 93 aa20.77■□□□□ 0.92
LDB1-202ENST00000425280 TRAV30A0A087WSZ9 112 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 OR2C1O95371 312 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 Q96MF0 132 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 TOMM40O96008 361 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 C11orf52Q96A22 123 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 FXYD5Q96DB9 178 aa20.76■□□□□ 0.91
LDB1-202ENST00000425280 A0A1W2PRE2 83 aa20.75■□□□□ 0.91
LDB1-202ENST00000425280 Q56UQ5 140 aa20.75■□□□□ 0.91
LDB1-202ENST00000425280 ZFHX3Q15911 3703 aa20.75■□□□□ 0.91
LDB1-202ENST00000425280 GGTLC3B5MD39 225 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 IGHV3-23P01764 117 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 ATF4P18848 351 aaPredicted RBP20.74■□□□□ 0.91
LDB1-202ENST00000425280 PRSS57Q6UWY2 283 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 APCP25054 2843 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 MDFIC2A0A1B0GVS7 189 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 YPEL3P61236 119 aaPredicted RBP20.74■□□□□ 0.91
LDB1-202ENST00000425280 STXBP6Q8NFX7 210 aa20.74■□□□□ 0.91
LDB1-202ENST00000425280 MRPL27Q9P0M9 148 aaKnown RBP20.74■□□□□ 0.91
LDB1-202ENST00000425280 HIST1H2BAQ96A08 127 aa20.73■□□□□ 0.91
LDB1-202ENST00000425280 TRBV9A0A0B4J1U6 114 aa20.73■□□□□ 0.91
LDB1-202ENST00000425280 VN1R17PQ8TDU5 208 aa20.73■□□□□ 0.91
LDB1-202ENST00000425280 YPEL4Q96NS1 127 aa20.73■□□□□ 0.91
LDB1-202ENST00000425280 RNF212Q495C1 297 aa20.72■□□□□ 0.91
LDB1-202ENST00000425280 C19orf54Q5BKX5 351 aa20.72■□□□□ 0.91
LDB1-202ENST00000425280 LEMD1Q68G75 181 aa20.72■□□□□ 0.91
LDB1-202ENST00000425280 BCL6BQ8N143 479 aaPredicted RBP20.72■□□□□ 0.91
LDB1-202ENST00000425280 FAM24BQ8N5W8 94 aa20.72■□□□□ 0.91
LDB1-202ENST00000425280 ZNF491Q8N8L2 437 aa20.72■□□□□ 0.91
LDB1-202ENST00000425280 SLC25A39Q9BZJ4 359 aaPredicted RBP20.72■□□□□ 0.91
LDB1-202ENST00000425280 CRIP2P52943 208 aaPredicted RBP20.71■□□□□ 0.91
LDB1-202ENST00000425280 SUMO1P63165 101 aaKnown RBP20.71■□□□□ 0.91
LDB1-202ENST00000425280 RHOGP84095 191 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 TRBV20OR9-2A0A075B6H5 130 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 WI2-2373I1.2A0A1W2PRP0 233 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 FCGR2BP31994 310 aaPredicted RBP20.71■□□□□ 0.91
LDB1-202ENST00000425280 C9orf152Q5JTZ5 239 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 RNF125Q96EQ8 232 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 TXN2Q99757 166 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 PITPNC1Q9UKF7 332 aa20.71■□□□□ 0.91
LDB1-202ENST00000425280 OR2T8A6NH00 312 aa20.7■□□□□ 0.9
LDB1-202ENST00000425280 GP9P14770 177 aa20.7■□□□□ 0.9
LDB1-202ENST00000425280 DEFB112Q30KQ8 113 aa20.7■□□□□ 0.9
LDB1-202ENST00000425280 C15orf32Q32M92 178 aa20.7■□□□□ 0.9
LDB1-202ENST00000425280 TMEM242Q9NWH2 141 aa20.7■□□□□ 0.9
LDB1-202ENST00000425280 NBPF19A0A087WUL8 3843 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 TRAV41A0A0B4J266 112 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 CXorf65A6NEN9 183 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 MT-ND4LP03901 98 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 IL4P05112 153 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 CRYBB3P26998 211 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 LINC01551Q86U37 167 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 SNRPCP09234 159 aaKnown RBP20.69■□□□□ 0.9
LDB1-202ENST00000425280 ZNF343Q6P1L6 599 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 ZNF502Q8TBZ5 544 aa20.69■□□□□ 0.9
LDB1-202ENST00000425280 M0QZK8 103 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 FSHBP01225 129 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 CTSGP08311 255 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 CSPG4Q6UVK1 2322 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 ELOVL1Q9BW60 279 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 CTDSP1Q9GZU7 261 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 LINC00527Q9UJ94 153 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 PGPEP1LA6NFU8 196 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 NECAP1Q8NC96 275 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 Q8WTZ3 238 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 SHANK2-AS3Q9BTD1 123 aa20.68■□□□□ 0.9
LDB1-202ENST00000425280 RPL35P42766 123 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms