RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 PRR20BP86481 221 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 PRR20AP86496 221 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
CALD1-206ENST00000424922 ZNF674Q2M3X9 581 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 MMD2Q8IY49 270 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 FAM210BQ96KR6 192 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 DEFA4P12838 97 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 RHOBP62745 196 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 RBX1P62877 108 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 TMEM144Q7Z5S9 345 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 Q8N6K4 173 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 NPBQ8NG41 125 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 OR10W1Q8NGF6 305 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 ANAPC16Q96DE5 110 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 TMEM208Q9BTX3 173 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
CALD1-206ENST00000424922 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
CALD1-206ENST00000424922 FCN1O00602 326 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 ACTL6BO94805 426 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 NDUFA3O95167 84 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 GNB1P62873 340 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 TNXAQ16473 311 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 MRPL52Q86TS9 123 aaKnown RBP11.92□□□□□ -0.5
CALD1-206ENST00000424922 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 PYGO2Q9BRQ0 406 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 DOK5Q9P104 306 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 RNASE2P10153 161 aaKnown RBP11.92□□□□□ -0.5
CALD1-206ENST00000424922 C16orf82Q7Z2V1 217 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
CALD1-206ENST00000424922 CGB1A6NKQ9 187 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 A8MWP6 167 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 PFN1P07737 140 aaKnown RBP11.91□□□□□ -0.5
CALD1-206ENST00000424922 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 NPPCP23582 126 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 SSMEM1Q8WWF3 244 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 SLC35E1Q96K37 410 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 SONP18583 2426 aaKnown RBP11.91□□□□□ -0.5
CALD1-206ENST00000424922 AKAP9Q99996 3911 aa11.91□□□□□ -0.5
CALD1-206ENST00000424922 MT-CO2P00403 227 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 LINC00869P0C866 280 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 COMPP49747 757 aaPredicted RBP11.9□□□□□ -0.5
CALD1-206ENST00000424922 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 SEPSECSQ9HD40 501 aaKnown RBP11.9□□□□□ -0.5
CALD1-206ENST00000424922 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 MXRA5Q9NR99 2828 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 H7BYZ3 331 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 CD99P14209 185 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 GCHFRP30047 84 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 ATP5G3P48201 142 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 ERHP84090 104 aaKnown RBP11.9□□□□□ -0.5
CALD1-206ENST00000424922 GAMTQ14353 236 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
CALD1-206ENST00000424922 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
CALD1-206ENST00000424922 RPL27AP46776 148 aaKnown RBP11.89□□□□□ -0.51
CALD1-206ENST00000424922 SSBP2P81877 361 aaPredicted RBP11.89□□□□□ -0.51
CALD1-206ENST00000424922 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
CALD1-206ENST00000424922 PIFOQ8TCI5 191 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 OR5B12Q96R08 314 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 FLNBO75369 2602 aaKnown RBP11.89□□□□□ -0.51
CALD1-206ENST00000424922 CNIH1O95406 144 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 CD69Q07108 199 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 C1RLQ9NZP8 487 aa11.89□□□□□ -0.51
CALD1-206ENST00000424922 MDFIC2A0A1B0GVS7 189 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 FSHBP01225 129 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 TRGC2P03986 189 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 APELAP0DMC3 54 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 SRP14P37108 136 aaKnown RBP11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 UBE2G2P60604 165 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 WT1-ASQ06250 92 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
CALD1-206ENST00000424922 ETFRF1Q6IPR1 90 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 SRSF12Q8WXF0 261 aaKnown RBP11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
CALD1-206ENST00000424922 GALR1P47211 349 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 Q8N9W7 124 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
CALD1-206ENST00000424922 FUT9Q9Y231 359 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 H3BUX3 64 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 M0R143 59 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 PHOX2AO14813 284 aa11.87□□□□□ -0.51
CALD1-206ENST00000424922 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms