RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
DDX55-203ENST00000421670 ZNF207O43670 478 aaKnown RBP12□□□□□ -0.49
DDX55-203ENST00000421670 IL4P05112 153 aa12□□□□□ -0.49
DDX55-203ENST00000421670 EDN2P20800 178 aa12□□□□□ -0.49
DDX55-203ENST00000421670 CAMLGP49069 296 aa12□□□□□ -0.49
DDX55-203ENST00000421670 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
DDX55-203ENST00000421670 FAM106AQ4KMX7 169 aa12□□□□□ -0.49
DDX55-203ENST00000421670 NPCDR1Q9BY65 106 aa12□□□□□ -0.49
DDX55-203ENST00000421670 ARL6Q9H0F7 186 aa12□□□□□ -0.49
DDX55-203ENST00000421670 IFNA5P01569 189 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 ZNF266Q14584 549 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 RPL7L1Q6DKI1 246 aaKnown RBP11.99□□□□□ -0.49
DDX55-203ENST00000421670 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 BPIFCQ8NFQ6 507 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 OR51G1Q8NGK1 321 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 Q8WTZ3 238 aa11.99□□□□□ -0.49
DDX55-203ENST00000421670 A0A0D9SG52 128 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 BOLA2-SMG1P6H3BVE0 249 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 OVOL1O14753 267 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 MPDU1O75352 247 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 FABP1P07148 127 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 LYZP61626 148 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 RAB31Q13636 194 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 USF2Q15853 346 aaPredicted RBP11.98□□□□□ -0.49
DDX55-203ENST00000421670 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 TMUB2Q71RG4 321 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 OR9G4Q8NGQ1 327 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 RSG1Q9BU20 258 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 PBDC1Q9BVG4 233 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 SLC45A2Q9UMX9 530 aa11.98□□□□□ -0.49
DDX55-203ENST00000421670 A8MWP6 167 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 LGALS9O00182 355 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 BCL2L11O43521 198 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 LINC00869P0C866 280 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 OPCMLQ14982 345 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 HSD17B11Q8NBQ5 300 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 SCGB1C1Q8TD33 95 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 RNF125Q96EQ8 232 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
DDX55-203ENST00000421670 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 TMEM213A2RRL7 107 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 TAAR5O14804 337 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 SELENOTP62341 195 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 LAMTOR1Q6IAA8 161 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 PARD6GQ9BYG4 376 aaPredicted RBP11.96□□□□□ -0.49
DDX55-203ENST00000421670 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
DDX55-203ENST00000421670 DOK5Q9P104 306 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.49
DDX55-203ENST00000421670 IGHV3-49A0A0A0MS15 119 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 WI2-2373I1.2A0A1W2PRP0 233 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 CD33P20138 364 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 GINS3Q9BRX5 216 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 PEMTQ9UBM1 199 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 UFC1Q9Y3C8 167 aa11.96□□□□□ -0.5
DDX55-203ENST00000421670 IGHV3OR16-13A0A075B7E8 117 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 BORCS7-ASMTA0A0B4J1R7 106 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 IGHV3-74A0A0B4J1X5 117 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 C2orf70A6NJV1 201 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 ORM2P19652 201 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 RPL29P47914 159 aaKnown RBP11.95□□□□□ -0.5
DDX55-203ENST00000421670 PRR20EP86478 221 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 PRR20CP86479 221 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 PRR20DP86480 221 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 PRR20BP86481 221 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 PRR20AP86496 221 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 ZNF709Q8N972 641 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
DDX55-203ENST00000421670 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 SELENOKQ9Y6D0 94 aa11.95□□□□□ -0.5
DDX55-203ENST00000421670 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
DDX55-203ENST00000421670 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 B2MP61769 119 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 IL34Q6ZMJ4 242 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 MGAM2Q2M2H8 2515 aa11.94□□□□□ -0.5
DDX55-203ENST00000421670 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 JTBO76095 146 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 CSN3P07498 182 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 METTL26Q96S19 204 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
DDX55-203ENST00000421670 K7EMT4 169 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 SAP30O75446 220 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
DDX55-203ENST00000421670 OR5G3P0C626 314 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 FOLR2P14207 255 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 CBLN1P23435 193 aa11.92□□□□□ -0.5
DDX55-203ENST00000421670 ELLP55199 621 aaPredicted RBP11.92□□□□□ -0.5
DDX55-203ENST00000421670 UHRF2Q96PU4 802 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms