RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 SPINT2O43291 252 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 Q8IYB0 196 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 FAM216BQ8N7L0 139 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 LINC01560Q8TB33 94 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHRD-204ENST00000420973 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 SLC25A15Q9Y619 301 aa11.91□□□□□ -0.5
CHRD-204ENST00000420973 POLQO75417 2590 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 TSPAN13O95857 204 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 MS4A5Q9H3V2 200 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 B9A039 149 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 ODF3L1Q8IXM7 274 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 OR52E5Q8NH55 327 aa11.9□□□□□ -0.5
CHRD-204ENST00000420973 A0A0G2JNJ9 132 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 LYNX1G3V0Z9 82 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 LYNX1P0DP58 116 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 COX5AP20674 150 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 GPR12P47775 334 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 REG1BP48304 166 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 ARL16Q0P5N6 197 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 CD177Q8N6Q3 437 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 Q9UFV3 132 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 JPT1Q9UK76 154 aa11.9□□□□□ -0.51
CHRD-204ENST00000420973 CRYBB3P26998 211 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 DLX1P56177 255 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 RND1Q92730 232 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 COQ2Q96H96 371 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 C16orf97H3BN30 126 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 MT-ND6P03923 174 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 RPL30P62888 115 aaKnown RBP11.89□□□□□ -0.51
CHRD-204ENST00000420973 SLC38A11Q08AI6 406 aa11.89□□□□□ -0.51
CHRD-204ENST00000420973 CLDN14O95500 239 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 UTF1Q5T230 341 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 ZNF497Q6ZNH5 498 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 DECR2Q9NUI1 292 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 A0A1W2PPM0 123 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 ID3Q02535 119 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 BSPH1Q075Z2 132 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 WFDC2Q14508 124 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 IGFL2Q6UWQ7 119 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 H3BRM9 83 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 NBL1P41271 181 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 SAMD5Q5TGI4 173 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 ARPC1AQ92747 370 aa11.88□□□□□ -0.51
CHRD-204ENST00000420973 USP9YO00507 2555 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 SCO2A0A1W2PP80 73 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 CD40P25942 277 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 LGALS4P56470 323 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 COX19Q49B96 90 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A8PA6NJQ4 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A22PA8MWA6 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 CAMPP49913 170 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 PAX9P55771 341 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 FAM57AQ8TBR7 257 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 LY6DQ14210 128 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 TIMM23BQ5SRD1 257 aa11.87□□□□□ -0.51
CHRD-204ENST00000420973 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
CHRD-204ENST00000420973 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 CHEK1O14757 476 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 LY6HO94772 140 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 LEPROTL1O95214 131 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 TBR1Q16650 682 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 OR10X1Q8NGY0 326 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
CHRD-204ENST00000420973 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 SFXN3Q9BWM7 321 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 LIN7CQ9NUP9 197 aaKnown RBP11.86□□□□□ -0.51
CHRD-204ENST00000420973 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
CHRD-204ENST00000420973 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms