RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 NDUFB8O95169 186 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 PRB2P02812 416 aaPredicted RBP10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 LINC00869P0C866 280 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 ZNF90Q03938 601 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 LYPD6BQ8NI32 183 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 RAB24Q969Q5 203 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 MS4A10Q96PG2 267 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 GNG7O60262 68 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 CLN5O75503 358 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 RHOGP84095 191 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRR20EP86478 221 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRR20CP86479 221 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRR20DP86480 221 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRR20BP86481 221 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRR20AP86496 221 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 DEFA5Q01523 94 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 ZNF726P1Q15940 193 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 GUK1Q16774 197 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 TIGITQ495A1 244 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 SPSB3Q6PJ21 355 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 UQCC3Q6UW78 93 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 OR1L4Q8NGR5 311 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PRSS22Q9GZN4 317 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 TMEM231Q9H6L2 316 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 IFNA1P01562 189 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 CCL20P78556 96 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PEA15Q15121 130 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 TOR2AQ5JU69 321 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 FAM78BQ5VT40 261 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 SSX7Q7RTT5 188 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 NOL4LQ96MY1 436 aaPredicted RBP10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 PFDN5Q99471 154 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 RNF2Q99496 336 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 NPFFR1Q9GZQ6 430 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 DOK5Q9P104 306 aa10.26□□□□□ -0.77
HLA-DMB-258ENST00000418107 SEC14L6B5MCN3 397 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 TRGV3P03979 118 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 IGF1P05019 195 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 OR5G3P0C626 314 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 ORM2P19652 201 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 CRIP2P52943 208 aaPredicted RBP10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 ATP5G2Q06055 141 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 HAGHQ16775 308 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 C15orf32Q32M92 178 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 C10orf113Q5VZT2 155 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 Q6ZS46 218 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 NECAP1Q8NC96 275 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 VN1R17PQ8TDU5 208 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 FAM210AQ96ND0 272 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 GNG13Q9P2W3 67 aa10.25□□□□□ -0.77
HLA-DMB-258ENST00000418107 RYR3Q15413 4870 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 DNAH3Q8TD57 4116 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 ANKRD34BA5PLL1 514 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 IGLC1P0CG04 106 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 RD3LP0DJH9 198 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 PF4V1P10720 104 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 TAS2R45P59539 299 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 LYZP61626 148 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 SAMD5Q5TGI4 173 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 EEF1AKMT3Q96AZ1 226 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 TXN2Q99757 166 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 TECRQ9NZ01 308 aaKnown RBP10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 FUT9Q9Y231 359 aa10.24□□□□□ -0.77
HLA-DMB-258ENST00000418107 OR2T8A6NH00 312 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 FAM223BA6NKX1 122 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 HYPMO75409 117 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 CXorf1O96002 111 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 PSG1P11464 419 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 PPT1P50897 306 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 TPPP2P59282 170 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 FAM223AQ8IWN6 122 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 MRPL32Q9BYC8 188 aaKnown RBP10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 TMPRSS5Q9H3S3 457 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 GNB4Q9HAV0 340 aa10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 GAR1Q9NY12 217 aaKnown RBP10.23□□□□□ -0.77
HLA-DMB-258ENST00000418107 ELOA3CA0A087WX78 387 aaPredicted RBP10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 KRBOX1C9JBD0 128 aa10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 H3BUA1 57 aa10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
HLA-DMB-258ENST00000418107 PSMB3P49720 205 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms