RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CXCL3P19876 107 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 ZNF90Q03938 601 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 WDR89Q96FK6 387 aaPredicted RBP13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 PRR25Q96S07 402 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 METTL26Q96S19 204 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 TSPAN4O14817 238 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 IL4P05112 153 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 S100A11P31949 105 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RRAS2P62070 204 aaPredicted RBP13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 FCN2Q15485 313 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 FAM90A2PQ658T7 463 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 STX12Q86Y82 276 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 TMEM61Q8N0U2 210 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SLC25A31Q9H0C2 315 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 IGSF23A1L1A6 192 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 LYL1P12980 280 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 HBG1P69891 147 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 HBG2P69892 147 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 VWC2Q2TAL6 325 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 LRRC37A5PQ49AS3 106 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 Q8N1Y9 231 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 CST7O76096 145 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 APOHP02749 345 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SELENOTP62341 195 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 BAXQ07812 192 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SLC38A11Q08AI6 406 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RNF2Q99496 336 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SPAG8Q99932 426 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 GIPP09681 153 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 NUP62P37198 522 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 CYP2G1PQ6ZSU1 146 aa13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 ST8SIA2Q92186 375 aa13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 A8MZ25 164 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 PLP1P60201 277 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 EWSR1Q01844 656 aaKnown RBP eCLIP13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 UQCC1Q9NVA1 299 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
COMMD3-BMI1-201ENST00000417470 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 BUB3O43684 328 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 FGL1Q08830 312 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 WDR83OSQ9Y284 106 aa13.14□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 IGHV3OR16-13A0A075B7E8 117 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 IGHV3-74A0A0B4J1X5 117 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 S100A7P31151 101 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 RAP2BP61225 183 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 NHLH2Q02577 135 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 OR2F1Q13607 317 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 THAP6Q8TBB0 222 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 AGPAT2O15120 278 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 DFFBO76075 338 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 LYZP61626 148 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 RAB31Q13636 194 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 PBDC1Q9BVG4 233 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 HELTA6NFD8 242 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 MPDU1O75352 247 aa13.11□□□□□ -0.31
COMMD3-BMI1-201ENST00000417470 CD7P09564 240 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms