RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SELENOKQ9Y6D0 94 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 SORL1Q92673 2214 aa17.39■□□□□ 0.37
SMARCB1-205ENST00000417137 FAM24AA6NFZ4 105 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 TSPAN4O14817 238 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 CCNKO75909 580 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 RRAS2P62070 204 aaPredicted RBP17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 ZNF90Q03938 601 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 GRAMD2BQ96HH9 432 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 RNF2Q99496 336 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 SPAG8Q99932 426 aaPredicted RBP17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 MED28Q9H204 178 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 VSIRQ9H7M9 311 aa17.38■□□□□ 0.37
SMARCB1-205ENST00000417137 IGHV3OR16-13A0A075B7E8 117 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 IGHV3-74A0A0B4J1X5 117 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 E5RGE8 158 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 HNRNPCP07910 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 PET100P0DJ07 73 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 OXA1LQ15070 435 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 LRRC37A5PQ49AS3 106 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 STX12Q86Y82 276 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 RABAC1Q9UI14 185 aa17.37■□□□□ 0.37
SMARCB1-205ENST00000417137 IGKV1OR2-108A0A075B7D4 117 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 SULT1A1P50225 295 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 Q8N1Y9 231 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 PPP1R1CQ8WVI7 109 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 ST8SIA2Q92186 375 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 RNF125Q96EQ8 232 aa17.36■□□□□ 0.37
SMARCB1-205ENST00000417137 CST7O76096 145 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 APOHP02749 345 aaPredicted RBP17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 S100A11P31949 105 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 NUP62P37198 522 aaPredicted RBP17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 CD81P60033 236 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 PAFAH1B2P68402 229 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 HBG1P69891 147 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 HBG2P69892 147 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 SLC38A11Q08AI6 406 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 OR2F1Q13607 317 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 TMEM252Q8N6L7 170 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 BPIFCQ8NFQ6 507 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 NEURL2Q9BR09 285 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 PBDC1Q9BVG4 233 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 SLC25A31Q9H0C2 315 aa17.35■□□□□ 0.37
SMARCB1-205ENST00000417137 P2RY1P47900 373 aa17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 ARL16Q0P5N6 197 aa17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 USF2Q15853 346 aaPredicted RBP17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 TEPPQ6URK8 271 aa17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 TCF24Q7RTU0 167 aa17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 DNAH3Q8TD57 4116 aa17.34■□□□□ 0.37
SMARCB1-205ENST00000417137 IGHV3-66A0A0C4DH42 116 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 OR4C46A6NHA9 309 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 EIF2B2P49770 351 aaKnown RBP17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 LYZP61626 148 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 SELENOTP62341 195 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 RPL11P62913 178 aaKnown RBP17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 FAM90A2PQ658T7 463 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 TMEM217Q8N7C4 229 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 U3KQE9 123 aa17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 PRKDCP78527 4128 aaKnown RBP17.33■□□□□ 0.36
SMARCB1-205ENST00000417137 IGSF23A1L1A6 192 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 DFFBO76075 338 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 MPC2O95563 127 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 S100A7P31151 101 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 ATP6V1FQ16864 119 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 CYP2G1PQ6ZSU1 146 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 LILRB2Q8N423 598 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 TUBA4BQ9H853 241 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 OR5AC2Q9NZP5 309 aa17.32■□□□□ 0.36
SMARCB1-205ENST00000417137 CD7P09564 240 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 CXCL3P19876 107 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 AP2S1P53680 142 aaPredicted RBP17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 CMC4P56277 68 aaPredicted RBP17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 RAB31Q13636 194 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 FCN2Q15485 313 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 B9D2Q9BPU9 175 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 UQCC1Q9NVA1 299 aa17.31■□□□□ 0.36
SMARCB1-205ENST00000417137 HELTA6NFD8 242 aa17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 A8MZ25 164 aa17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 H0YIZ8 118 aa17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 DNASE2O00115 360 aaPredicted RBP17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 IGHV4-30-4P0DP06 118 aa17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 ASB13Q8WXK3 278 aa17.3■□□□□ 0.36
SMARCB1-205ENST00000417137 IGKV3-7A0A075B6H7 116 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 OR11H12B2RN74 326 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 BAXQ07812 192 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 C16orf54Q6UWD8 224 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 PPP1R14BQ96C90 147 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 RNF126Q9BV68 326 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 TMEM147Q9BVK8 224 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 SLC45A2Q9UMX9 530 aa17.29■□□□□ 0.36
SMARCB1-205ENST00000417137 BUB3O43684 328 aa17.28■□□□□ 0.36
SMARCB1-205ENST00000417137 S100A7AQ86SG5 101 aa17.28■□□□□ 0.36
SMARCB1-205ENST00000417137 OR11H7Q8NGC8 314 aa17.28■□□□□ 0.36
SMARCB1-205ENST00000417137 THAP6Q8TBB0 222 aa17.28■□□□□ 0.36
SMARCB1-205ENST00000417137 TRAV2A0A0B4J234 112 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 ORM2P19652 201 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 GATA2P23769 480 aaPredicted RBP17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 TFPI2P48307 235 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 EWSR1Q01844 656 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 NHLH2Q02577 135 aa17.27■□□□□ 0.36
SMARCB1-205ENST00000417137 VWC2Q2TAL6 325 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms