RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LOC102724200A0A096LPH7 203 aaPredicted RBP9.57□□□□□ -0.88
LINC00339-202ENST00000416769 RPS10-NUDT3A0A1W2PQS6 291 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 H3BP45 60 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 I3L2K1 104 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 LGALS9O00182 355 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 CAV2P51636 162 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
LINC00339-202ENST00000416769 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 AKAP14Q86UN6 197 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 SCARB1Q8WTV0 552 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 MISP3Q96FF7 219 aa9.57□□□□□ -0.88
LINC00339-202ENST00000416769 TECRQ9NZ01 308 aaKnown RBP9.57□□□□□ -0.88
LINC00339-202ENST00000416769 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
LINC00339-202ENST00000416769 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 G3V3Q6 166 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 K7EIM0 57 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 MT-CO2P00403 227 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 SULT1A1P50225 295 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 MLANAQ16655 118 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
LINC00339-202ENST00000416769 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 TXN2Q99757 166 aa9.56□□□□□ -0.88
LINC00339-202ENST00000416769 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
LINC00339-202ENST00000416769 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 A8MWP6 167 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 RPL12P30050 165 aaKnown RBP9.55□□□□□ -0.88
LINC00339-202ENST00000416769 S100A11P31949 105 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 FCGR2BP31994 310 aaPredicted RBP9.55□□□□□ -0.88
LINC00339-202ENST00000416769 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
LINC00339-202ENST00000416769 OPRK1P41145 380 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 MFAP4P55083 255 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 PRR20EP86478 221 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 PRR20CP86479 221 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 PRR20DP86480 221 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 PRR20BP86481 221 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 PRR20AP86496 221 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 ZNF546Q86UE3 836 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 STX12Q86Y82 276 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 GGACTQ9BVM4 153 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
LINC00339-202ENST00000416769 NUPR2A6NF83 97 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 HMSDA8MTL9 139 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 SMLR1H3BR10 107 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
LINC00339-202ENST00000416769 DLK1P80370 383 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 NHLH2Q02577 135 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 BAXQ07812 192 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 ZNF124Q15973 351 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 ATP6V1FQ16864 119 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 OR8G2PQ6IF36 304 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 TNFSF18Q9UNG2 199 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
LINC00339-202ENST00000416769 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 SPRY2O43597 315 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 CST7O76096 145 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 C1QBP02746 253 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 CLEC3BP05452 202 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 GPR183P32249 361 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 NPBWR1P48145 328 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 HBG1P69891 147 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 HBG2P69892 147 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 GAMTQ14353 236 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
LINC00339-202ENST00000416769 TMEM116Q8NCL8 245 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 AQP10Q96PS8 301 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 HSPB11Q9Y547 144 aa9.53□□□□□ -0.88
LINC00339-202ENST00000416769 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 CLN5O75503 358 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 C8orf88P0DMB2 117 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 ACOT7LQ6ZUV0 252 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 TMEM217Q8N7C4 229 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
LINC00339-202ENST00000416769 RYR1P21817 5038 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
LINC00339-202ENST00000416769 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
LINC00339-202ENST00000416769 PFDN1O60925 122 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 IGHV3-48P01763 117 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 CD300CQ08708 224 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 FAM106AQ4KMX7 169 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 Q56UQ5 140 aa9.51□□□□□ -0.89
LINC00339-202ENST00000416769 SPSB3Q6PJ21 355 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms