RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ZNF585BQ52M93 769 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 NPBQ8NG41 125 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 NCBP2LA6PVI3 153 aaKnown RBP11.53□□□□□ -0.56
SGCE-202ENST00000415788 RAMP3O60896 148 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 GAGE1Q13065 139 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 IZUMO4Q1ZYL8 232 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 TRAPPC1Q9Y5R8 145 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 PXMP4Q9Y6I8 212 aa11.53□□□□□ -0.56
SGCE-202ENST00000415788 C17orf112F2Z3M2 114 aa11.52□□□□□ -0.57
SGCE-202ENST00000415788 NDUFA3O95167 84 aa11.52□□□□□ -0.57
SGCE-202ENST00000415788 RANP62826 216 aaKnown RBP11.52□□□□□ -0.57
SGCE-202ENST00000415788 TXNDC17Q9BRA2 123 aa11.52□□□□□ -0.57
SGCE-202ENST00000415788 F6UZH7 168 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 VWC2Q2TAL6 325 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 VMA21Q3ZAQ7 101 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 OR8G2PQ6IF36 304 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 C5orf56Q8N8D9 126 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 ZNF709Q8N972 641 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 VSTM2AQ8TAG5 236 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 RITA1Q96K30 269 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
SGCE-202ENST00000415788 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
SGCE-202ENST00000415788 TRAV9-1A0A075B6T8 112 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 RRHO14718 337 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 PAGE4O60829 102 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 RPLP1P05386 114 aaKnown RBP11.51□□□□□ -0.57
SGCE-202ENST00000415788 PSG5Q15238 335 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 Q8N9W7 124 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 OR10P1Q8NGE3 313 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 RASL11BQ9BPW5 248 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
SGCE-202ENST00000415788 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
SGCE-202ENST00000415788 ERVK-16P61578 105 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 LINC01551Q86U37 167 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 KCNIP2Q9NS61 270 aa11.5□□□□□ -0.57
SGCE-202ENST00000415788 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
SGCE-202ENST00000415788 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 DLEU1O43261 78 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 S1PR2O95136 353 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 ZNF25P17030 456 aaPredicted RBP11.49□□□□□ -0.57
SGCE-202ENST00000415788 CNTFRP26992 372 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 PLGLAQ15195 96 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
SGCE-202ENST00000415788 MARCH11A6NNE9 402 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 SLC25A17O43808 307 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 AMY1AP04745 511 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 LINC00614P0C842 121 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
SGCE-202ENST00000415788 ESDP10768 282 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 G0S2P27469 103 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
SGCE-202ENST00000415788 TPPP2P59282 170 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 SELENOTP62341 195 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 OR4A5Q8NH83 315 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 FBXL15Q9H469 300 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
SGCE-202ENST00000415788 ZNF705FA8MVS1 300 aaPredicted RBP11.48□□□□□ -0.57
SGCE-202ENST00000415788 P0C879 139 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 ZNF705DP0CH99 300 aaPredicted RBP11.48□□□□□ -0.57
SGCE-202ENST00000415788 ZNF705BP0CI00 300 aaPredicted RBP11.48□□□□□ -0.57
SGCE-202ENST00000415788 CHRNA7P36544 502 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 PRIMA1Q86XR5 153 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 MIEN1Q9BRT3 115 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 BET1LQ9NYM9 111 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 CBY1Q9Y3M2 126 aa11.48□□□□□ -0.57
SGCE-202ENST00000415788 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
SGCE-202ENST00000415788 KRASP01116 189 aa11.47□□□□□ -0.57
SGCE-202ENST00000415788 HLA-DRB1P01911 266 aa11.47□□□□□ -0.57
SGCE-202ENST00000415788 CRYGBP07316 175 aa11.47□□□□□ -0.57
SGCE-202ENST00000415788 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
SGCE-202ENST00000415788 NDUFA7O95182 113 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 NPPCP23582 126 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 BLCAPP62952 87 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
SGCE-202ENST00000415788 Q8N2B8 174 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms