RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 IAPPP10997 89 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 SRP14P37108 136 aaKnown RBP12.32□□□□□ -0.44
SHMT2-202ENST00000414700 CNN1P51911 297 aaKnown RBP12.32□□□□□ -0.44
SHMT2-202ENST00000414700 PRSS8Q16651 343 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 C5orf64Q2M2E5 130 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 C20orf144Q9BQM9 153 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-202ENST00000414700 RBKSQ9H477 322 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 OR51B2Q9Y5P1 312 aa12.32□□□□□ -0.44
SHMT2-202ENST00000414700 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-202ENST00000414700 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 H3BP45 60 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 SYNGR2O43760 224 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 IER3P46695 156 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-202ENST00000414700 PAX9P55771 341 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 RPL23P62829 140 aaKnown RBP12.31□□□□□ -0.44
SHMT2-202ENST00000414700 GNB1P62873 340 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 SCGB1C1Q8TD33 95 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 ANAPC16Q96DE5 110 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
SHMT2-202ENST00000414700 CA2P00918 260 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 TNXAQ16473 311 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 OR10W1Q8NGF6 305 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 IMMP2LQ96T52 175 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 A6NDX4 124 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-202ENST00000414700 FAM90A26D6RGX4 464 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 AMY1AP04745 511 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-202ENST00000414700 APELAP0DMC3 54 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 HSPE1P61604 102 aaKnown RBP12.3□□□□□ -0.44
SHMT2-202ENST00000414700 Q6YL49 198 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
SHMT2-202ENST00000414700 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 MMD2Q8IY49 270 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
SHMT2-202ENST00000414700 TMEM250H0YL14 139 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 HOXA3O43365 443 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 NDPQ00604 133 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 C5orf56Q8N8D9 126 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 HSPB9Q9BQS6 159 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 FAM103A1Q9BTL3 118 aaKnown RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 NDUFA4L2Q9NRX3 87 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 COMPP49747 757 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-202ENST00000414700 SERF2P84101 59 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
SHMT2-202ENST00000414700 ACTL6BO94805 426 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 HNF1AP20823 631 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 CX3CL1P78423 397 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
SHMT2-202ENST00000414700 TEX43Q6ZNM6 134 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 TEX29Q8N6K0 151 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 PINX1Q96BK5 328 aaKnown RBP12.27□□□□□ -0.44
SHMT2-202ENST00000414700 BTF3L4Q96K17 158 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 RAB40CQ96S21 281 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 TMEM160Q9NX00 188 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 C1RLQ9NZP8 487 aa12.27□□□□□ -0.44
SHMT2-202ENST00000414700 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
SHMT2-202ENST00000414700 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
SHMT2-202ENST00000414700 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-202ENST00000414700 COTL1Q14019 142 aa12.27□□□□□ -0.45
SHMT2-202ENST00000414700 SRSF12Q8WXF0 261 aaKnown RBP12.27□□□□□ -0.45
SHMT2-202ENST00000414700 RPUSD4Q96CM3 377 aaKnown RBP12.27□□□□□ -0.45
SHMT2-202ENST00000414700 MOB4Q9Y3A3 225 aa12.27□□□□□ -0.45
SHMT2-202ENST00000414700 IGHV7-81A0A0B4J1V7 117 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 CNIH1O95406 144 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
SHMT2-202ENST00000414700 RPL15P61313 204 aaKnown RBP12.26□□□□□ -0.45
SHMT2-202ENST00000414700 WT1-ASQ06250 92 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 FXYD3Q14802 87 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 Q6ZS46 218 aa12.26□□□□□ -0.45
SHMT2-202ENST00000414700 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms