RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PRCDQ00LT1 54 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 DHODHQ02127 395 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 PPP1R1AQ13522 171 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 KLF5Q13887 457 aaPredicted RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 Q56UQ5 140 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 LYZL2Q7Z4W2 148 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 ZNF429Q86V71 674 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 OR9G4Q8NGQ1 327 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 OR5B3Q8NH48 314 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 ZNF502Q8TBZ5 544 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 RNASE8Q8TDE3 154 aaKnown RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 RBPMSQ93062 196 aaKnown RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 GPR146Q96CH1 333 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 SCGB3A2Q96PL1 93 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 OR4C12Q96R67 309 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 TSC22D3Q99576 134 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 PDCD10Q9BUL8 212 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 GPR61Q9BZJ8 451 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 FKBP11Q9NYL4 201 aa3.69□□□□□ -1.82
VPS41-205ENST00000414632 ZNF256Q9Y2P7 627 aaPredicted RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 F11RQ9Y624 299 aaKnown RBP3.69□□□□□ -1.82
VPS41-205ENST00000414632 SORL1Q92673 2214 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 HUWE1Q7Z6Z7 4374 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 CEBPZOSA8MTT3 80 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 PRSS46E5RG02 174 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 K7EIM0 57 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 TGOLN2O43493 480 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 ZNF207O43670 478 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 GGCTO75223 188 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 ATP6V1G1O75348 118 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 ATG12O94817 140 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 TOMM40O96008 361 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 MT-CO2P00403 227 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 SULT1A3P0DMM9 295 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 SULT1A4P0DMN0 295 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 RNASE2P10153 161 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 ANXA3P12429 323 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 BTCP35070 178 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 NKX2-1P43699 371 aaPredicted RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 UBE2MP61081 183 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 ERHP84090 104 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 ANKRD55Q3KP44 614 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 THOC7Q6I9Y2 204 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 PLET1Q6UQ28 207 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 UNQ9165/PRO28630Q6UXU0 137 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 IL34Q6ZMJ4 242 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 CENPSQ8N2Z9 138 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 OR11H4Q8NGC9 324 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 OR52B4Q8NGK2 314 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 SCARB1Q8WTV0 552 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 GALNT14Q96FL9 552 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 CXorf58Q96LI9 332 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 ASCL2Q99929 193 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 CHRDL1Q9BU40 450 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 C21orf62Q9NYP8 219 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 THYN1Q9P016 225 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 MRPL36Q9P0J6 103 aaKnown RBP3.68□□□□□ -1.82
VPS41-205ENST00000414632 KCNIP3Q9Y2W7 256 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 TMEM56-RWDD3S4R434 201 aa3.68□□□□□ -1.82
VPS41-205ENST00000414632 TRAV6A0A075B6T7 132 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3OR16-13A0A075B7E8 117 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3-49A0A0A0MS15 119 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 TRBV7-1A0A0A6YYK4 115 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3-74A0A0B4J1X5 117 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 TMEM213A2RRL7 107 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 NAP1L6A6NFF2 107 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 C2orf70A6NJV1 201 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 I3L2K1 104 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 PLA2G10O15496 165 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 CYB5BO43169 146 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 LYRM1O43325 122 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 ADAP1O75689 374 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 NDUFB6O95139 128 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 SFT2D2O95562 160 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 IAPPP10997 89 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 FOLR2P14207 255 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 GP9P14770 177 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 SNCAP37840 140 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 INSL3P51460 131 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 SPCS3P61009 180 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 GUCA2BQ16661 112 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 TATDN3Q17R31 274 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 KLK9Q2XQG4 91 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 TMEM128Q5BJH2 165 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 HSD17B13Q7Z5P4 300 aaPredicted RBP3.67□□□□□ -1.82
VPS41-205ENST00000414632 LGI3Q8N145 548 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 OR1P1Q8NH06 330 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 OR1S1Q8NH92 325 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 DYNLRB2Q8TF09 96 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 ZNF414Q96IQ9 312 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 SLC25A21Q9BQT8 299 aaPredicted RBP3.67□□□□□ -1.82
VPS41-205ENST00000414632 C20orf24Q9BUV8 137 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 MAGT1Q9H0U3 335 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 C20orf85Q9H1P6 137 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 RBKSQ9H477 322 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms