RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNF737O75373 536 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 IGHV3-9P01782 118 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CD3DP04234 171 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF688P0C7X2 276 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 LGALS3P17931 250 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CBLN1P23435 193 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 COL8A2P25067 703 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 IL3RAP26951 378 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 INPP1P49441 399 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CRYBA2P53672 197 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CDK5R1Q15078 307 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 FOXL2NBQ6ZUU3 175 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 DEFB107AQ8IZN7 70 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 C15orf53Q8NAA6 179 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF555Q8NEP9 628 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CHCHD10Q8WYQ3 142 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PGLYRP4Q96LB8 373 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 CCL13Q99616 98 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PLEKHF2Q9H8W4 249 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 SLC39A9Q9NUM3 307 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PARP14Q460N5 1801 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 ARID2Q68CP9 1835 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 ABCC1P33527 1531 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 EHBP1L1Q8N3D4 1523 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 MARF1Q9Y4F3 1742 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 MYH14Q7Z406 1995 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PPRC1Q5VV67 1664 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 TDRD15B5MCY1 1934 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 DNMT1P26358 1616 aaKnown RBP2.75□□□□□ -1.97
SF3B1-203ENST00000414174 UNC13BO14795 1591 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 NFAT5O94916 1531 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 TRBV20OR9-2A0A075B6H5 130 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 IGHV6-1A0A0B4J1U7 121 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 A0A0J9YXV3 536 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 IGLL5B9A064 214 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 UMAD1C9J7I0 102 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 C9JQL5 133 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 E9PLD3 99 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 GNGT2O14610 69 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 ATP6V0E1O15342 81 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 COX6A1P12074 109 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 VDAC1P21796 283 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 MFAP2P55001 183 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 LSM3P62310 102 aaKnown RBP2.75□□□□□ -1.97
SF3B1-203ENST00000414174 WFDC2Q14508 124 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 ETDBQ3ZM63 59 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 PYDC2Q56P42 97 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 C6orf223Q8N319 242 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 RAB42Q8N4Z0 105 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 CNRIP1Q96F85 164 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-203ENST00000414174 C17orf77Q96MU5 243 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 POLR2J2Q9GZM3 115 aaKnown RBP2.75□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF581Q9P0T4 197 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 V9GY05 133 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 CFAP43Q8NDM7 1665 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 CCDC88AQ3V6T2 1871 aa2.75□□□□□ -1.97
SF3B1-203ENST00000414174 VWDEQ8N2E2 1590 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 STRCQ7RTU9 1775 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 TRIP11Q15643 1979 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.74□□□□□ -1.97
SF3B1-203ENST00000414174 NUP210Q8TEM1 1887 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-203ENST00000414174 TRBV5-4A0A0C4DH59 114 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 A0A0G2JRQ6 117 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 LINC01548A6NM66 108 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 A8MWL6 223 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 H3BUT2 72 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF253O75346 499 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 PPP1R3DO95685 299 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 IGLV3-27P01718 113 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 FCGR2CP31995 323 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF80P51504 273 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-203ENST00000414174 LINC00313P59037 77 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 NPC2P61916 151 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 MLF2Q15773 248 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-203ENST00000414174 TMEM155Q4W5P6 130 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 NMSQ5H8A3 153 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 WDR38Q5JTN6 314 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 FAM78AQ5JUQ0 283 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 LGALS9CQ6DKI2 356 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 SMIM5Q71RC9 77 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF329Q86UD4 541 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 SBSPONQ8IVN8 264 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 METTL27Q8N6F8 245 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-203ENST00000414174 POM121L12Q8N7R1 296 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 SIGLECL1Q8N7X8 197 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 ZNRF1Q8ND25 227 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 OR10G2Q8NGC3 310 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 OR8A1Q8NGG7 326 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 OR5H2Q8NGV7 314 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 FAM3DQ96BQ1 224 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 LINC00479Q96M42 142 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 HIST1H4GQ99525 98 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 RNF126Q9BV68 326 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 SCRT1Q9BWW7 348 aa2.74□□□□□ -1.97
SF3B1-203ENST00000414174 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms