RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ACOT6Q3I5F7 207 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 PXDC1Q5TGL8 231 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 OR1N2Q8NGR9 330 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 BRI3O95415 125 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 M6PRP20645 277 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 RND2P52198 227 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 ZNF616Q08AN1 781 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 OR4X1Q8NH49 305 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 B9D2Q9BPU9 175 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 H3BUA1 57 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 I3L521 148 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 RAB2AP61019 212 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 MLANAQ16655 118 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 C19orf54Q5BKX5 351 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 C19orf35Q6ZS72 473 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 CXorf58Q96LI9 332 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 TRGV9Q99603 122 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 SLC45A2Q9UMX9 530 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
SCAMP4-204ENST00000414057 IGKV1OR2-108A0A075B7D4 117 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 K7EIM0 57 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 HBE1P02100 147 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 ELLP55199 621 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 B2MP61769 119 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 PRR20EP86478 221 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 PRR20CP86479 221 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 PRR20DP86480 221 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 PRR20BP86481 221 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 PRR20AP86496 221 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 ACSM6Q6P461 480 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 IL34Q6ZMJ4 242 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 STPG3Q8N7X2 389 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 OR5T1Q8NG75 326 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 GNB4Q9HAV0 340 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
SCAMP4-204ENST00000414057 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 TRAV1-1A0A0B4J248 108 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 FABP1P07148 127 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 OR10J1P30954 320 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 NPBWR1P48145 328 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 KIAA0141Q14154 515 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 CYP2G1PQ6ZSU1 146 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 COMMD7Q86VX2 200 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 TXN2Q99757 166 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 SLC39A9Q9NUM3 307 aa13.02□□□□□ -0.33
SCAMP4-204ENST00000414057 CLN5O75503 358 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 FHITP49789 147 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 MFAP4P55083 255 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 MIC13Q5XKP0 118 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 SLC7A5P1Q8MH63 180 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 NECAP1Q8NC96 275 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 OR10G4Q8NGN3 311 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 OR10G9Q8NGN4 311 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 OR10G7Q8NGN6 311 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 OR5B12Q96R08 314 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 ATP6V0BQ99437 205 aa13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 ACTR3CQ9C0K3 210 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-204ENST00000414057 IGKV1D-37A0A075B6S9 117 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 RAB19A4D1S5 217 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 FAM223BA6NKX1 122 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 NHLRC4P0CG21 123 aaPredicted RBP13□□□□□ -0.33
SCAMP4-204ENST00000414057 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
SCAMP4-204ENST00000414057 EIF4E3Q8N5X7 224 aaKnown RBP13□□□□□ -0.33
SCAMP4-204ENST00000414057 MBD3L1Q8WWY6 194 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 MARC2Q969Z3 335 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 HRH4Q9H3N8 390 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 VSIRQ9H7M9 311 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
SCAMP4-204ENST00000414057 MRPL36Q9P0J6 103 aaKnown RBP13□□□□□ -0.33
SCAMP4-204ENST00000414057 FBXL7Q9UJT9 491 aa13□□□□□ -0.33
SCAMP4-204ENST00000414057 OVOL1O14753 267 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 LINC00869P0C866 280 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 BPIFCQ8NFQ6 507 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 RNF2Q99496 336 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 ZNF355PQ9NSJ1 428 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 C21orf62Q9NYP8 219 aa12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-204ENST00000414057 LINC01619G3V211 115 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 OR2J3O76001 311 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 YIF1AO95070 293 aa12.98□□□□□ -0.33
SCAMP4-204ENST00000414057 LGALS1P09382 135 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms