RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAM3BP58499 235 aaPredicted RBP8.59□□□□□ -1.03
LIMS2-210ENST00000413578 FXYD7P58549 80 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 TNP2Q05952 138 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 NMSQ5H8A3 153 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 TMEM88Q6PEY1 159 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 OR52I2Q8NH67 350 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 TERB2Q8NHR7 220 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 ZFAND1Q8TCF1 268 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 HEYLQ9NQ87 328 aaPredicted RBP8.59□□□□□ -1.03
LIMS2-210ENST00000413578 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 CACNG5Q9UF02 275 aa8.59□□□□□ -1.03
LIMS2-210ENST00000413578 YTHDF2Q9Y5A9 579 aaKnown RBP8.59□□□□□ -1.03
LIMS2-210ENST00000413578 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 A8MTW9 85 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 IGKV3-20P01619 116 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 OR5AC1P0C628 307 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 PSMB3P49720 205 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 NCS1P62166 190 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 OR8G2PQ6IF36 304 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 ETFRF1Q6IPR1 90 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 SELENOHQ8IZQ5 122 aaKnown RBP8.58□□□□□ -1.04
LIMS2-210ENST00000413578 OR51G1Q8NGK1 321 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
LIMS2-210ENST00000413578 GPR146Q96CH1 333 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 RNF125Q96EQ8 232 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 ABHD1Q96SE0 405 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 RTBDNQ9BSG5 229 aaPredicted RBP8.58□□□□□ -1.04
LIMS2-210ENST00000413578 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
LIMS2-210ENST00000413578 IGKV1D-37A0A075B6S9 117 aa8.57□□□□□ -1.04
LIMS2-210ENST00000413578 LOC102723971A0A1B0GUV8 181 aa8.57□□□□□ -1.04
LIMS2-210ENST00000413578 NUP62P37198 522 aaPredicted RBP8.57□□□□□ -1.04
LIMS2-210ENST00000413578 RNASE12Q5GAN4 147 aaKnown RBP8.57□□□□□ -1.04
LIMS2-210ENST00000413578 SPATA31B1PQ5VZV4 182 aa8.57□□□□□ -1.04
LIMS2-210ENST00000413578 RNASE11Q8TAA1 199 aaKnown RBP8.57□□□□□ -1.04
LIMS2-210ENST00000413578 MARCH1Q8TCQ1 289 aa8.57□□□□□ -1.04
LIMS2-210ENST00000413578 ACY3Q96HD9 319 aa8.57□□□□□ -1.04
LIMS2-210ENST00000413578 A0A0J9YX75 114 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 TEX13DA0A0J9YY54 714 aaPredicted RBP8.56□□□□□ -1.04
LIMS2-210ENST00000413578 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 HBE1P02100 147 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 HTN3P15516 51 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 ID1P41134 155 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 ALDH3B2P48448 385 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 PSG9Q00887 426 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 MEF2DQ14814 521 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 C1orf194Q5T5A4 169 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 FAM78BQ5VT40 261 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 AMTNQ6UX39 209 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 TMEM229BQ8NBD8 167 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 ZNRF2Q8NHG8 242 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 C17orf77Q96MU5 243 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 LINC00052Q96N35 136 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 NAA60Q9H7X0 242 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 GOLT1BQ9Y3E0 138 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 TMEM56-RWDD3S4R434 201 aa8.56□□□□□ -1.04
LIMS2-210ENST00000413578 F6UB75 175 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 RORCP51449 518 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 VBP1P61758 197 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 SUPT4H1P63272 117 aaKnown RBP8.55□□□□□ -1.04
LIMS2-210ENST00000413578 ZNF90Q03938 601 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 SURF2Q15527 256 aaPredicted RBP8.55□□□□□ -1.04
LIMS2-210ENST00000413578 RRN3P1Q2M238 152 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 SCGB2B2Q4G0G5 96 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 GSG1LQ6UXU4 331 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 NOXA1Q86UR1 476 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 PBDC1Q9BVG4 233 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 U3KQ87 197 aa8.55□□□□□ -1.04
LIMS2-210ENST00000413578 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 CRYM-AS1A6NIL9 109 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 ISLRO14498 428 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 RAB3DO95716 219 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 TAS2R19P59542 299 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 DAD1P61803 113 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 KLF9Q13886 244 aaPredicted RBP8.54□□□□□ -1.04
LIMS2-210ENST00000413578 GPR107Q5VW38 600 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 Q8N1X5 172 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 COQ8AQ8NI60 647 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 IGF2BP2-AS1Q96M15 143 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 FUNDC2Q9BWH2 189 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 HSPB7Q9UBY9 170 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 GPR132Q9UNW8 380 aa8.54□□□□□ -1.04
LIMS2-210ENST00000413578 A0A087WXM4 84 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 FAM25AB3EWG3 89 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 FAM25CB3EWG5 89 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 FAM25GB3EWG6 89 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 CRXO43186 299 aaPredicted RBP8.53□□□□□ -1.04
LIMS2-210ENST00000413578 GAMTQ14353 236 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 FAAP20Q6NZ36 180 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 STEAP1BQ6NZ63 245 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 IL22RA2Q969J5 263 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms