RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 TMEM158Q8WZ71 300 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 FAM210BQ96KR6 192 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 C19orf24Q9BVV8 132 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 TRAV30A0A087WSZ9 112 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 BCL2P10415 239 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 GALR1P47211 349 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 C2orf68Q2NKX9 166 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 TAF15Q92804 592 aaKnown RBP eCLIP7.01□□□□□ -1.29
SYNE1-211ENST00000413186 TRAV8-1A0A0A6YYK1 113 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 J3QLI3 93 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 SLC25A48Q6ZT89 311 aaKnown RBP7□□□□□ -1.29
SYNE1-211ENST00000413186 RNF166Q96A37 237 aaPredicted RBP7□□□□□ -1.29
SYNE1-211ENST00000413186 NHP2Q9NX24 153 aaKnown RBP7□□□□□ -1.29
SYNE1-211ENST00000413186 CXorf65A6NEN9 183 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 FAM90A9PA6NNJ1 464 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 RNF223E7ERA6 249 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 SEC11AP67812 179 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 LRRC75BQ2VPJ9 315 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 TPTE2P1Q5T6R2 138 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 PRB2P02812 416 aaPredicted RBP7□□□□□ -1.29
SYNE1-211ENST00000413186 OR4X1Q8NH49 305 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 AAMDCQ9H7C9 122 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 TIMM23O14925 209 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 NPFFO15130 113 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 LYZP61626 148 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 MEF2BQ02080 365 aaPredicted RBP7□□□□□ -1.29
SYNE1-211ENST00000413186 RNF126Q9BV68 326 aa7□□□□□ -1.29
SYNE1-211ENST00000413186 TMEM262E9PQX1 116 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-211ENST00000413186 DEFB113Q30KQ7 82 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 C11orf53Q8IXP5 236 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 PRSS22Q9GZN4 317 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
SYNE1-211ENST00000413186 CARHSP1Q9Y2V2 147 aaKnown RBP6.99□□□□□ -1.29
SYNE1-211ENST00000413186 IGHV2-70DA0A0C4DH43 119 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 UPK2O00526 184 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 IGHV2-70P01814 119 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 APELAP0DMC3 54 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 HCP5Q6MZN7 132 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 VKORC1L1Q8N0U8 176 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 KIR3DL3Q8N743 410 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 Q96MF0 132 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 C11orf94C9JXX5 98 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 UBE2E1P51965 193 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 DLK1P80370 383 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 OR10J3Q5JRS4 329 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 CENPVQ7Z7K6 275 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-211ENST00000413186 PPP1R27Q86WC6 154 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 LDLRAD3Q86YD5 345 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 A0A0G2JLM5 398 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 ZNF98A6NK75 572 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 H3BQ15 152 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 LHBP01229 141 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 ORM2P19652 201 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 C1orf122Q6ZSJ8 110 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 ARPC1AQ92747 370 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 DNAJC4Q9NNZ3 241 aa6.99□□□□□ -1.29
SYNE1-211ENST00000413186 CREBBPQ92793 2442 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 IGKV3OR2-268A0A0C4DH90 116 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 BUB1B-PAK6H3BSN5 160 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 FGF16O43320 207 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 VPREB1P12018 145 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 ID3Q02535 119 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 V9GYY9 64 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 C7orf71A4D174 169 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 TMEM189A5PLL7 270 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE12JA6NER3 117 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-211ENST00000413186 ESDP10768 282 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 ATP5G2Q06055 141 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE1Q13065 139 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE4Q13068 117 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE5Q13069 117 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE6Q13070 117 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 PRR4Q16378 134 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 SSMEM1Q8WWF3 244 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 REG4Q9BYZ8 158 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 IGHV1-3A0A0C4DH29 117 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GNG4P50150 75 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 DUX4L9Q6RFH8 374 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-211ENST00000413186 PTPN13Q12923 2485 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 LYL1P12980 280 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 FAM78BQ5VT40 261 aa6.98□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE7O76087 117 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE12FP0CL80 117 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE12GP0CL81 117 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 GAGE12IP0CL82 117 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 LOXL3P58215 753 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
SYNE1-211ENST00000413186 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms