RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 NPIPB3Q92617 1050 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 ACY3Q96HD9 319 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
ITGA6-204ENST00000412899 KRTAP17-1Q9BYP8 105 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
ITGA6-204ENST00000412899 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 SYNGR2O43760 224 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 IGKV1-17P01599 117 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 OR10J1P30954 320 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 OR1S2Q8NGQ3 325 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 MITD1Q8WV92 249 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
ITGA6-204ENST00000412899 WRBO00258 174 aa13.67□□□□□ -0.22
ITGA6-204ENST00000412899 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
ITGA6-204ENST00000412899 RAB11AP62491 216 aa13.67□□□□□ -0.22
ITGA6-204ENST00000412899 RPP30P78346 268 aaKnown RBP13.67□□□□□ -0.22
ITGA6-204ENST00000412899 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
ITGA6-204ENST00000412899 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
ITGA6-204ENST00000412899 C11orf68Q9H3H3 251 aaKnown RBP13.67□□□□□ -0.22
ITGA6-204ENST00000412899 UPK1BO75841 260 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
ITGA6-204ENST00000412899 CD5P06127 495 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 H2AFB2P0C5Z0 115 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 NPPCP23582 126 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 GPX4P36969 197 aaPredicted RBP13.66□□□□□ -0.22
ITGA6-204ENST00000412899 ASAH1Q13510 395 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 Q8WTZ3 238 aa13.66□□□□□ -0.22
ITGA6-204ENST00000412899 IGHV3-66A0A0C4DH42 116 aa13.65□□□□□ -0.22
ITGA6-204ENST00000412899 DNASE2O00115 360 aaPredicted RBP13.65□□□□□ -0.22
ITGA6-204ENST00000412899 APOHP02749 345 aaPredicted RBP13.65□□□□□ -0.22
ITGA6-204ENST00000412899 NKX2-1P43699 371 aaPredicted RBP13.65□□□□□ -0.22
ITGA6-204ENST00000412899 YPEL3P61236 119 aaPredicted RBP13.65□□□□□ -0.22
ITGA6-204ENST00000412899 ID3Q02535 119 aa13.65□□□□□ -0.22
ITGA6-204ENST00000412899 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
ITGA6-204ENST00000412899 ST8SIA2Q92186 375 aa13.65□□□□□ -0.22
ITGA6-204ENST00000412899 METTL26Q96S19 204 aa13.65□□□□□ -0.22
ITGA6-204ENST00000412899 DEFB4AO15263 64 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
ITGA6-204ENST00000412899 RPL11P62913 178 aaKnown RBP13.64□□□□□ -0.23
ITGA6-204ENST00000412899 GAMTQ14353 236 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 IAH1Q2TAA2 248 aaPredicted RBP13.64□□□□□ -0.23
ITGA6-204ENST00000412899 SPANXN5Q5MJ07 72 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
ITGA6-204ENST00000412899 SLC35E1Q96K37 410 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 SEC22CQ9BRL7 303 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 GSKIPQ9P0R6 139 aa13.64□□□□□ -0.23
ITGA6-204ENST00000412899 RD3LP0DJH9 198 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 DEFB131AP59861 70 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 LEMD1Q68G75 181 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 NARS2Q96I59 477 aaKnown RBP13.63□□□□□ -0.23
ITGA6-204ENST00000412899 MS4A6AQ9H2W1 248 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 TMEM231Q9H6L2 316 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
ITGA6-204ENST00000412899 STRAPQ9Y3F4 350 aaKnown RBP13.63□□□□□ -0.23
ITGA6-204ENST00000412899 A0A1W2PS18 150 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 ZFP92A6NM28 416 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 H3BP45 60 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 SSSCA1O60232 199 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 DFFBO76075 338 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 CRYBB3P26998 211 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 TCTAP57738 103 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 IFITM3Q01628 133 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 LILRB2Q8N423 598 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 ZBTB8BQ8NAP8 495 aaPredicted RBP13.62□□□□□ -0.23
ITGA6-204ENST00000412899 ENKURQ8TC29 256 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 PSENENQ9NZ42 101 aa13.62□□□□□ -0.23
ITGA6-204ENST00000412899 FAM25EA8MYX2 175 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 CCSO14618 274 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 TOMM40O96008 361 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 IL4P05112 153 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 STHQ8IWL8 128 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 C12orf45Q8N5I9 185 aaPredicted RBP13.61□□□□□ -0.23
ITGA6-204ENST00000412899 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
ITGA6-204ENST00000412899 TRAV2A0A0B4J234 112 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 IGLL5B9A064 214 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PSG1P11464 419 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PRR20EP86478 221 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PRR20CP86479 221 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PRR20DP86480 221 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PRR20BP86481 221 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 PRR20AP86496 221 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 GRAMD2BQ96HH9 432 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 SMIM8Q96KF7 97 aa13.6□□□□□ -0.23
ITGA6-204ENST00000412899 C5orf51A6NDU8 294 aa13.59□□□□□ -0.23
ITGA6-204ENST00000412899 FABP1P07148 127 aa13.59□□□□□ -0.23
ITGA6-204ENST00000412899 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
ITGA6-204ENST00000412899 P2RY1P47900 373 aa13.59□□□□□ -0.23
ITGA6-204ENST00000412899 FAM24BQ8N5W8 94 aa13.59□□□□□ -0.23
ITGA6-204ENST00000412899 RAB40CQ96S21 281 aa13.59□□□□□ -0.23
ITGA6-204ENST00000412899 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.24
ITGA6-204ENST00000412899 C11orf94C9JXX5 98 aa13.58□□□□□ -0.24
ITGA6-204ENST00000412899 PRSS46E5RG02 174 aa13.58□□□□□ -0.24
ITGA6-204ENST00000412899 IL5P05113 134 aa13.58□□□□□ -0.24
ITGA6-204ENST00000412899 ZNF90Q03938 601 aa13.58□□□□□ -0.24
ITGA6-204ENST00000412899 USF2Q15853 346 aaPredicted RBP13.58□□□□□ -0.24
ITGA6-204ENST00000412899 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms