RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SCGB2B2Q4G0G5 96 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 AP3S1Q92572 193 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 TMEM222Q9H0R3 208 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
MRPL55-220ENST00000411464 FXYD7P58549 80 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 RNF212Q495C1 297 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 MZT2AQ6P582 158 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 Q6ZR54 194 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 NOXA1Q86UR1 476 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 OR52I2Q8NH67 350 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
MRPL55-220ENST00000411464 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 MTFP1Q9UDX5 166 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 FAT2Q9NYQ8 4349 aa11.92□□□□□ -0.5
MRPL55-220ENST00000411464 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-220ENST00000411464 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 HTN3P15516 51 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-220ENST00000411464 ID1P41134 155 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 OR51G1Q8NGK1 321 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 RBPMSQ93062 196 aaKnown RBP11.91□□□□□ -0.5
MRPL55-220ENST00000411464 ABHD1Q96SE0 405 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 CACNG5Q9UF02 275 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 CACFD1Q9UGQ2 172 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
MRPL55-220ENST00000411464 RAB3DO95716 219 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 PSG1P11464 419 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 CNPY1Q3B7I2 92 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 MCFD2Q8NI22 146 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 PBDC1Q9BVG4 233 aa11.9□□□□□ -0.5
MRPL55-220ENST00000411464 SAV1Q9H4B6 383 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-220ENST00000411464 C14orf166Q9Y224 244 aaKnown RBP11.9□□□□□ -0.5
MRPL55-220ENST00000411464 CTDSP2O14595 271 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 NXPH3O95157 252 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 TAS2R19P59542 299 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 DEFB1P60022 68 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 ZNF575Q86XF7 245 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 SELENOHQ8IZQ5 122 aaKnown RBP11.89□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM229BQ8NBD8 167 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 LHFPL5Q8TAF8 219 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 MIXL1Q9H2W2 232 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 PLA2G2EQ9NZK7 142 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 GOLT1BQ9Y3E0 138 aa11.89□□□□□ -0.51
MRPL55-220ENST00000411464 RGS5O15539 181 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 HBE1P02100 147 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 KLF9Q13886 244 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-220ENST00000411464 OXA1LQ15070 435 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM268Q5VZI3 342 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 SPATA31B1PQ5VZV4 182 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 STEAP1BQ6NZ63 245 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 C7orf50Q9BRJ6 194 aaKnown RBP11.88□□□□□ -0.51
MRPL55-220ENST00000411464 RTBDNQ9BSG5 229 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-220ENST00000411464 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
MRPL55-220ENST00000411464 NAA60Q9H7X0 242 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 EXTL2Q9UBQ6 330 aa11.88□□□□□ -0.51
MRPL55-220ENST00000411464 DNAH17Q9UFH2 4485 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 PSMB3P49720 205 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 PSG9Q00887 426 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 MEF2DQ14814 521 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 NMSQ5H8A3 153 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 OR8G2PQ6IF36 304 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 ZNF709Q8N972 641 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 U3KQ87 197 aa11.87□□□□□ -0.51
MRPL55-220ENST00000411464 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 SULT1A3P0DMM9 295 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 SULT1A4P0DMN0 295 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
MRPL55-220ENST00000411464 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
MRPL55-220ENST00000411464 DAD1P61803 113 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 SURF2Q15527 256 aaPredicted RBP11.85□□□□□ -0.51
MRPL55-220ENST00000411464 ZNF79Q15937 498 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 RRN3P1Q2M238 152 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 FAM78BQ5VT40 261 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM88Q6PEY1 159 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 LGI3Q8N145 548 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms