RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AMY1AP04745 511 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
EPHA4-202ENST00000409854 RAB31Q13636 194 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 DMRTA1Q5VZB9 504 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 C19orf35Q6ZS72 473 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 C16orf82Q7Z2V1 217 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 STPG3Q8N7X2 389 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 WFDC11Q8NEX6 87 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 OR10G4Q8NGN3 311 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 OR2T6Q8NHC8 308 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 SGMS2Q8NHU3 365 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 C2CD4CQ8TF44 421 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 WNT10AQ9GZT5 417 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 TMEM231Q9H6L2 316 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 MRPL36Q9P0J6 103 aaKnown RBP4.35□□□□□ -1.71
EPHA4-202ENST00000409854 SOX21Q9Y651 276 aaPredicted RBP4.35□□□□□ -1.71
EPHA4-202ENST00000409854 IGLV11-55A0A075B6I3 123 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 NPSP0C0P6 89 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 CCL20P78556 96 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 RPL19P84098 196 aaKnown RBP4.35□□□□□ -1.71
EPHA4-202ENST00000409854 TM4SF20Q53R12 229 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 C19orf54Q5BKX5 351 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 MIC13Q5XKP0 118 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 ABHD5Q8WTS1 349 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 FAM103A1Q9BTL3 118 aaKnown RBP4.35□□□□□ -1.71
EPHA4-202ENST00000409854 SLC39A9Q9NUM3 307 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 FAM96BQ9Y3D0 163 aa4.35□□□□□ -1.71
EPHA4-202ENST00000409854 SPG11Q96JI7 2443 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 PSMB11A5LHX3 300 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 TGOLN2O43493 480 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 APELAP0DMC3 54 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 ORAOV1Q8WV07 137 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 FANCD2OSQ96PS1 177 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 ACTR3CQ9C0K3 210 aaPredicted RBP4.34□□□□□ -1.71
EPHA4-202ENST00000409854 SMDT1Q9H4I9 107 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 TCRBV4S1A1TA0A5B7 111 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 C20orf202A1L168 122 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 MAP1LC3B2A6NCE7 125 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 H3BUX3 64 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 K7EIM0 57 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 CYB5BO43169 146 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 MT-CO2P00403 227 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 OR10J1P30954 320 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 FGF8P55075 233 aaPredicted RBP4.34□□□□□ -1.71
EPHA4-202ENST00000409854 CYP2G1PQ6ZSU1 146 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 FAM110DQ8TAY7 271 aaPredicted RBP4.34□□□□□ -1.71
EPHA4-202ENST00000409854 TRGV9Q99603 122 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 MAP1LC3BQ9GZQ8 125 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 CENPEQ02224 2701 aa4.34□□□□□ -1.71
EPHA4-202ENST00000409854 ATP6V0E1O15342 81 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 CLEC3BP05452 202 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 ADCYAP1P18509 176 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 RND2P52198 227 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 GCSAMLQ5JQS6 135 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM219Q86XT9 240 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 CIARTQ8N365 385 aaPredicted RBP4.34□□□□□ -1.72
EPHA4-202ENST00000409854 OR4X1Q8NH49 305 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 NPIPB3Q92617 1050 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 PBDC1Q9BVG4 233 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 SLC25A22Q9H936 323 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF580Q9UK33 172 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 PITPNC1Q9UKF7 332 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 PTPN13Q12923 2485 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 ZFHX3Q15911 3703 aa4.34□□□□□ -1.72
EPHA4-202ENST00000409854 CELSR1Q9NYQ6 3014 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 RBFOX3A6NFN3 312 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 C9JQL5 133 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 KRTAP1-1Q07627 177 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM241Q24JQ0 296 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 DEFB112Q30KQ8 113 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 BCL6BQ8N143 479 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-202ENST00000409854 ACY3Q96HD9 319 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 HELZ2Q9BYK8 2649 aaKnown RBP4.33□□□□□ -1.72
EPHA4-202ENST00000409854 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 LOC102723971A0A1B0GUV8 181 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 MDFIC2A0A1B0GVS7 189 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 BRI3O95415 125 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 IGF1P05019 195 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 OR5G3P0C626 314 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 DEFA4P12838 97 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-202ENST00000409854 IER3P46695 156 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 LCN15Q6UWW0 184 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 WFDC12Q8WWY7 111 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 ABCA1O95477 2261 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 GCN1Q92616 2671 aaKnown RBP4.33□□□□□ -1.72
EPHA4-202ENST00000409854 LINC01548A6NM66 108 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 GCGP01275 180 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 IGHG2P01859 326 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 PLP1P60201 277 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 UBE2G2P60604 165 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 RHOBP62745 196 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms