RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TOMM40O96008 361 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 C8orf88P0DMB2 117 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 APELAP0DMC3 54 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 HNF1AP20823 631 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 CCL20P78556 96 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 FAM78BQ5VT40 261 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 TMEM219Q86XT9 240 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 OR5T1Q8NG75 326 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 NARS2Q96I59 477 aaKnown RBP7.68□□□□□ -1.18
POLR1A-202ENST00000409024 USMG5Q96IX5 58 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 LINC00052Q96N35 136 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 C21orf62Q9NYP8 219 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 GNG13Q9P2W3 67 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 FBXL7Q9UJT9 491 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 VPREB3Q9UKI3 123 aa7.68□□□□□ -1.18
POLR1A-202ENST00000409024 TGP01266 2768 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 CUBNO60494 3623 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 F8W036 122 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 GNG7O60262 68 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 HYPMO75409 117 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 RD3LP0DJH9 198 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
POLR1A-202ENST00000409024 ICAM4Q14773 271 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 LY6EQ16553 131 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 ECSCRQ19T08 205 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 C10orf113Q5VZT2 155 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 SSX7Q7RTT5 188 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 BCL6BQ8N143 479 aaPredicted RBP7.67□□□□□ -1.18
POLR1A-202ENST00000409024 SVBPQ8N300 66 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 Q8WTZ3 238 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 EEF1AKMT3Q96AZ1 226 aa7.67□□□□□ -1.18
POLR1A-202ENST00000409024 NKX6-2Q9C056 277 aaPredicted RBP7.67□□□□□ -1.18
POLR1A-202ENST00000409024 MRPL36Q9P0J6 103 aaKnown RBP7.67□□□□□ -1.18
POLR1A-202ENST00000409024 ABCA1O95477 2261 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 TMEM250H0YL14 139 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 PDE6DO43924 150 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 OR2J3O76001 311 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 NDUFB8O95169 186 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 OR2C1O95371 312 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 IGKV1-17P01599 117 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 IGHV4-59P01825 116 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
POLR1A-202ENST00000409024 SFTA3P0C7M3 94 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 GCHFRP30047 84 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
POLR1A-202ENST00000409024 FGF8P55075 233 aaPredicted RBP7.66□□□□□ -1.18
POLR1A-202ENST00000409024 ZNF90Q03938 601 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 FAM74A3Q4VXF1 159 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 GCSAMLQ5JQS6 135 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 OR51G1Q8NGK1 321 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 TMEM37Q8WXS4 190 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 PRSS22Q9GZN4 317 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 NPFFR1Q9GZQ6 430 aa7.66□□□□□ -1.18
POLR1A-202ENST00000409024 SEPSECSQ9HD40 501 aaKnown RBP7.66□□□□□ -1.18
POLR1A-202ENST00000409024 SOX21Q9Y651 276 aaPredicted RBP7.66□□□□□ -1.18
POLR1A-202ENST00000409024 NOTCH1P46531 2555 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 A0A0G2JLM5 398 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 WI2-2373I1.2A0A1W2PRP0 233 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 LINC01548A6NM66 108 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 F6UZH7 168 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.18
POLR1A-202ENST00000409024 SNAPINO95295 136 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 PSG1P11464 419 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 GATA2P23769 480 aaPredicted RBP7.65□□□□□ -1.18
POLR1A-202ENST00000409024 RPL15P61313 204 aaKnown RBP7.65□□□□□ -1.18
POLR1A-202ENST00000409024 RHOGP84095 191 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 MEF2BQ02080 365 aaPredicted RBP7.65□□□□□ -1.18
POLR1A-202ENST00000409024 ATP5G2Q06055 141 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 HAGHQ16775 308 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 Q56UQ5 140 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 SOHLH1Q5JUK2 328 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 C19orf35Q6ZS72 473 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 RARRES2Q99969 163 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 TCEAL7Q9BRU2 100 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 TMEM231Q9H6L2 316 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.18
POLR1A-202ENST00000409024 HIGD1AQ9Y241 93 aa7.65□□□□□ -1.18
POLR1A-202ENST00000409024 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.19
POLR1A-202ENST00000409024 A0A1B0GV50 99 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 MDFIC2A0A1B0GVS7 189 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 C9JQL5 133 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 F8W735 103 aaPredicted RBP7.64□□□□□ -1.19
POLR1A-202ENST00000409024 G3V318 75 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 IGHV3-48P01763 117 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 APOC3P02656 99 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 SRP14P37108 136 aaKnown RBP7.64□□□□□ -1.19
POLR1A-202ENST00000409024 RAB9AP51151 201 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 CFHR3Q02985 330 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 RELQ04864 619 aaPredicted RBP7.64□□□□□ -1.19
POLR1A-202ENST00000409024 KRTAP1-1Q07627 177 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 C15orf32Q32M92 178 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 TIGITQ495A1 244 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 C9orf152Q5JTZ5 239 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 PATE2Q6UY27 113 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 ZNF600Q6ZNG1 722 aa7.64□□□□□ -1.19
POLR1A-202ENST00000409024 MIR17HGQ75NE6 70 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms