RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SMLR1H3BR10 107 aa22.26■■□□□ 1.15
USP42-202ENST00000404008 C8orf88P0DMB2 117 aa22.26■■□□□ 1.15
USP42-202ENST00000404008 OR51G1Q8NGK1 321 aa22.26■■□□□ 1.15
USP42-202ENST00000404008 MARC2Q969Z3 335 aa22.26■■□□□ 1.15
USP42-202ENST00000404008 IL4P05112 153 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 AQP10Q96PS8 301 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 MRPL27Q9P0M9 148 aaKnown RBP22.25■■□□□ 1.15
USP42-202ENST00000404008 FXYD6-FXYD2A0A087WZ82 144 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 UBE2L5PA0A1B0GUS4 154 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 OR2F1Q13607 317 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 CLINT1Q14677 625 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 CYP2G1PQ6ZSU1 146 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 ZNF546Q86UE3 836 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 WDR83OSQ9Y284 106 aa22.25■■□□□ 1.15
USP42-202ENST00000404008 WI2-2373I1.2A0A1W2PRP0 233 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 IGLV1-51P01701 117 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 TMEM182Q6ZP80 229 aaPredicted RBP22.24■■□□□ 1.15
USP42-202ENST00000404008 ST6GAL2Q96JF0 529 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 MGST2Q99735 147 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 TNFSF18Q9UNG2 199 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 NOTCH1P46531 2555 aa22.24■■□□□ 1.15
USP42-202ENST00000404008 NUP62P37198 522 aaPredicted RBP22.23■■□□□ 1.15
USP42-202ENST00000404008 USF2Q15853 346 aaPredicted RBP22.23■■□□□ 1.15
USP42-202ENST00000404008 RNF125Q96EQ8 232 aa22.23■■□□□ 1.15
USP42-202ENST00000404008 DNAH3Q8TD57 4116 aa22.22■■□□□ 1.15
USP42-202ENST00000404008 IGHV7-4-1A0A0J9YVY3 117 aa22.22■■□□□ 1.15
USP42-202ENST00000404008 GATA2P23769 480 aaPredicted RBP22.22■■□□□ 1.15
USP42-202ENST00000404008 INO80EQ8NBZ0 244 aaPredicted RBP22.22■■□□□ 1.15
USP42-202ENST00000404008 ATP5SQ99766 215 aa22.22■■□□□ 1.15
USP42-202ENST00000404008 MLXQ9UH92 298 aa22.22■■□□□ 1.15
USP42-202ENST00000404008 SMPXQ9UHP9 88 aa22.22■■□□□ 1.15
USP42-202ENST00000404008 AGPAT2O15120 278 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 CFDP00746 253 aaPredicted RBP22.21■■□□□ 1.15
USP42-202ENST00000404008 SELENOTP62341 195 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 BTNL8Q6UX41 500 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 BPIFCQ8NFQ6 507 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 DYNLRB2Q8TF09 96 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 METTL26Q96S19 204 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 SMIM3Q9BZL3 60 aa22.21■■□□□ 1.15
USP42-202ENST00000404008 RNF222A6NCQ9 220 aa22.2■■□□□ 1.14
USP42-202ENST00000404008 NPPCP23582 126 aa22.2■■□□□ 1.14
USP42-202ENST00000404008 CRYBB3P26998 211 aa22.2■■□□□ 1.14
USP42-202ENST00000404008 TECRQ9NZ01 308 aaKnown RBP22.2■■□□□ 1.14
USP42-202ENST00000404008 IGHV3-49A0A0A0MS15 119 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 APOHP02749 345 aaPredicted RBP22.19■■□□□ 1.14
USP42-202ENST00000404008 FGF7P21781 194 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 EGFEM1PQ0D2K5 195 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 RAB31Q13636 194 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 DEFB114Q30KQ6 69 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 BEAN1Q3B7T3 259 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 KPRPQ5T749 579 aaPredicted RBP22.19■■□□□ 1.14
USP42-202ENST00000404008 PBDC1Q9BVG4 233 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 SLC45A2Q9UMX9 530 aa22.19■■□□□ 1.14
USP42-202ENST00000404008 CHEK1O14757 476 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 MPDU1O75352 247 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 DFFBO76075 338 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 CAMLGP49069 296 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 LYZP61626 148 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 TCTE3Q8IZS6 198 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 RHPN1-AS1Q9BWJ2 59 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 FBXL17Q9UF56 701 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 RABAC1Q9UI14 185 aa22.18■■□□□ 1.14
USP42-202ENST00000404008 GGTLC1Q9BX51 225 aa22.17■■□□□ 1.14
USP42-202ENST00000404008 WFDC1Q9HC57 220 aa22.17■■□□□ 1.14
USP42-202ENST00000404008 SELENOKQ9Y6D0 94 aa22.17■■□□□ 1.14
USP42-202ENST00000404008 IGHV3OR16-13A0A075B7E8 117 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 IGHV3-74A0A0B4J1X5 117 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 HNRNPCP07910 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
USP42-202ENST00000404008 CD300EQ496F6 205 aaPredicted RBP22.16■■□□□ 1.14
USP42-202ENST00000404008 AKAP14Q86UN6 197 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 OR11H4Q8NGC9 324 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 OR2K2Q8NGT1 345 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 ST8SIA2Q92186 375 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 WDR61Q9GZS3 305 aaKnown RBP22.16■■□□□ 1.14
USP42-202ENST00000404008 VSIRQ9H7M9 311 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 U3KQE9 123 aa22.16■■□□□ 1.14
USP42-202ENST00000404008 ARPC5O15511 151 aa22.15■■□□□ 1.14
USP42-202ENST00000404008 LINC00869P0C866 280 aa22.15■■□□□ 1.14
USP42-202ENST00000404008 KRTAP10-11P60412 298 aa22.15■■□□□ 1.14
USP42-202ENST00000404008 NPCDR1Q9BY65 106 aa22.15■■□□□ 1.14
USP42-202ENST00000404008 EIF2B2P49770 351 aaKnown RBP22.14■■□□□ 1.14
USP42-202ENST00000404008 AP2S1P53680 142 aaPredicted RBP22.14■■□□□ 1.14
USP42-202ENST00000404008 OPCMLQ14982 345 aa22.14■■□□□ 1.14
USP42-202ENST00000404008 IGHV3-66A0A0C4DH42 116 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 IZUMO1RA6ND01 250 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 HMSDA8MTL9 139 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 ORM2P19652 201 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 BMI1P35226 326 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 PLP1P60201 277 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 NARS2Q96I59 477 aaKnown RBP22.13■■□□□ 1.13
USP42-202ENST00000404008 RNF2Q99496 336 aa22.13■■□□□ 1.13
USP42-202ENST00000404008 A0A1W2PS18 150 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 IFNA5P01569 189 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 RPL29P47914 159 aaKnown RBP22.12■■□□□ 1.13
USP42-202ENST00000404008 PRR20EP86478 221 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 PRR20CP86479 221 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 PRR20DP86480 221 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 PRR20BP86481 221 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 PRR20AP86496 221 aa22.12■■□□□ 1.13
USP42-202ENST00000404008 LCN12Q6JVE5 192 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms