RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 C2orf83Q53S99 150 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 LINC00305Q7Z4B0 112 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 MEGF9Q9H1U4 602 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 ZNF292O60281 2723 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 NCOR2Q9Y618 2525 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 IGHV2-70DA0A0C4DH43 119 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 K7EN84 100 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 FRMD6-AS1P0C7T7 363 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PDLIM4P50479 330 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRRX1P54821 245 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 TMPRSS3P57727 454 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 GNG5P63218 68 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 SSBP2P81877 361 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRR20EP86478 221 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRR20CP86479 221 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRR20DP86480 221 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRR20BP86481 221 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 PRR20AP86496 221 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 ZNF439Q8NDP4 499 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 FAM222BQ8WU58 562 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 SLC25A33Q9BSK2 321 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 CLEC5AQ9NY25 188 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 HILPDAQ9Y5L2 63 aa6.24□□□□□ -1.41
HDAC9-201ENST00000401921 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-201ENST00000401921 PRSS46E5RG02 174 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 LY6HO94772 140 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 AREGP15514 252 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 CD24P25063 80 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 MC5RP33032 325 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 ASCL5Q7RTU5 278 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 TPPP3Q9BW30 176 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 FBXL15Q9H469 300 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 UQCR10Q9UDW1 63 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 S4R3C0 116 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 ATMQ13315 3056 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.23□□□□□ -1.41
HDAC9-201ENST00000401921 DCHS1Q96JQ0 3298 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 TRAV30A0A087WSZ9 112 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 GGTLC3B5MD39 225 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 NUPR1O60356 82 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 TOMM40O96008 361 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 SRIP30626 198 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 PPOXP50336 477 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 WT1-ASQ06250 92 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 TPTE2P1Q5T6R2 138 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 MORN5Q5VZ52 161 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 NUP37Q8NFH4 326 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 SCNM1Q9BWG6 230 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 ZNF586Q9NXT0 402 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 SPTBN4Q9H254 2564 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 E7EQL1 145 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 CNTFRP26992 372 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 LGALS4P56470 323 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 ARF6P62330 175 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 TEX43Q6ZNM6 134 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 CACNG8Q8WXS5 425 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 BORCS7Q96B45 105 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
HDAC9-201ENST00000401921 PPIAL4CA0A0B4J2A2 164 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 CCL21O00585 134 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 TYMSP04818 313 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 THBDP07204 575 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 NBEAP1P0C6P0 100 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 PPIAL4GP0DN37 164 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 PSG1P11464 419 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 APOBEC3AP31941 199 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-201ENST00000401921 TMEM30BQ3MIR4 351 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 TEX36Q5VZQ5 186 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 WDR73Q6P4I2 378 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 MUC15Q8N387 334 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 PNKDQ8N490 385 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 ST6GALNAC3Q8NDV1 305 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 OR4B1Q8NGF8 309 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 FNDC4Q9H6D8 234 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-201ENST00000401921 NDUFA4L2Q9NRX3 87 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 CTSZQ9UBR2 303 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 HYPMO75409 117 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 HSBP1O75506 76 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 GOSR1O95249 250 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 IGHV1-8P0DP01 117 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 TCF15Q12870 199 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 FAM19A2Q8N3H0 131 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 PERPQ96FX8 193 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 RITA1Q96K30 269 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 C19orf24Q9BVV8 132 aa6.22□□□□□ -1.41
HDAC9-201ENST00000401921 A0A1W2PPI3 338 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 C22orf46C9J442 243 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 COMPP49747 757 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-201ENST00000401921 RPL15P61313 204 aaKnown RBP6.21□□□□□ -1.41
HDAC9-201ENST00000401921 SCGB2A2Q13296 93 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 POU2AF1Q16633 256 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 ZNF833PQ6ZTB9 187 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 KIR3DL3Q8N743 410 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 OR5AN1Q8NGI8 311 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 TMEM167AQ8TBQ9 72 aa6.21□□□□□ -1.41
HDAC9-201ENST00000401921 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.41
HDAC9-201ENST00000401921 TMEM133Q9H2Q1 129 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms